Mike Smith
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/FourCSeq |
| Branch: RELEASE_3_12 |
| Last Commit: 5575105 |
| Last Changed Date: 2020-10-27 10:58:38 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:31:22 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the FourCSeq package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 646/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Mike Smith
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: FourCSeq |
| Version: 1.24.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/FourCSeq_1.24.0.tar.gz && rm -rf FourCSeq.buildbin-libdir && mkdir FourCSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FourCSeq.buildbin-libdir FourCSeq_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL FourCSeq_1.24.0.zip && rm FourCSeq_1.24.0.tar.gz FourCSeq_1.24.0.zip |
| StartedAt: 2021-05-05 19:15:22 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 19:16:47 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 84.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/FourCSeq_1.24.0.tar.gz && rm -rf FourCSeq.buildbin-libdir && mkdir FourCSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FourCSeq.buildbin-libdir FourCSeq_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL FourCSeq_1.24.0.zip && rm FourCSeq_1.24.0.tar.gz FourCSeq_1.24.0.zip
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
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install for i386
* installing *source* package 'FourCSeq' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'FourCSeq'
finding HTML links ... done
FourC html
addFragments html
addPeaks html
addViewpointFrags html
combineFragEnds html
countFragmentOverlaps html
countFragmentOverlapsSecondCutter html
distFitMonotone html
distFitMonotoneSymmetric html
fc html
fcf html
findViewpointFragments html
getAllResults html
getDifferences html
getDistAroundVp html
getNormalizationFactors html
getReferenceSeq html
getZScores html
normalizeRPM html
plotDifferences html
plotFits html
plotNormalizationFactors html
plotScatter html
plotZScores html
smoothCounts html
smoothHitPerCent html
writeTrackFiles html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'FourCSeq' is deprecated and will be removed from Bioconductor
version 3.13
** testing if installed package can be loaded from final location
Warning: Package 'FourCSeq' is deprecated and will be removed from Bioconductor
version 3.13
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'FourCSeq' ...
** testing if installed package can be loaded
Warning: Package 'FourCSeq' is deprecated and will be removed from Bioconductor
version 3.13
* MD5 sums
packaged installation of 'FourCSeq' as FourCSeq_1.24.0.zip
* DONE (FourCSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'FourCSeq' successfully unpacked and MD5 sums checked