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BUILD BIN report for BiSeq on tokay1

This page was generated on 2021-02-22 12:37:08 -0500 (Mon, 22 Feb 2021).

To the developers/maintainers of the BiSeq package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 193/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BiSeq 1.30.0
Katja Hebestreit
Snapshot Date: 2021-02-21 14:52:07 -0500 (Sun, 21 Feb 2021)
URL: https://git.bioconductor.org/packages/BiSeq
Branch: RELEASE_3_12
Last Commit: e946e2d
Last Changed Date: 2020-10-27 10:50:37 -0500 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: BiSeq
Version: 1.30.0
Command: rm -rf BiSeq.buildbin-libdir && mkdir BiSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=BiSeq.buildbin-libdir BiSeq_1.30.0.tar.gz
StartedAt: 2021-02-22 08:42:32 -0500 (Mon, 22 Feb 2021)
EndedAt: 2021-02-22 08:43:13 -0500 (Mon, 22 Feb 2021)
EllapsedTime: 41.0 seconds
RetCode: 0
Status:   OK   
PackageFile: BiSeq_1.30.0.zip
PackageFileSize: 1.238 MiB

Command output

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###
### Running command:
###
###   rm -rf BiSeq.buildbin-libdir && mkdir BiSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=BiSeq.buildbin-libdir BiSeq_1.30.0.tar.gz
###
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* installing *source* package 'BiSeq' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BiSeq'
    finding HTML links ... done
    BSraw-class                             html  
    finding level-2 HTML links ... done

    BSrel-class                             html  
    DMRs                                    html  
    annotateGRanges                         html  
    betaRegression                          html  
    betaResults                             html  
    betaResultsNull                         html  
    binomLikelihoodSmooth                   html  
    clusterSites                            html  
    clusterSitesToGR                        html  
    compareTwoSamples                       html  
    covBoxplots                             html  
    covStatistics                           html  
    estLocCor                               html  
    filterByCov                             html  
    filterBySharedRegions                   html  
    findDMRs                                html  
    globalTest                              html  
    limitCov                                html  
    logisticRegression                      html  
    makeVariogram                           html  
    plotBindingSites                        html  
    plotMeth                                html  
    plotMethMap                             html  
    plotSmoothMeth                          html  
    predictMeth                             html  
    predictedMeth                           html  
    promoters                               html  
    rawToRel                                html  
    readBismark                             html  
    rrbs                                    html  
    smoothVariogram                         html  
    summarizeRegions                        html  
    testClusters                            html  
    trimClusters                            html  
    vario                                   html  
    writeBED                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'BiSeq' as BiSeq_1.30.0.zip
* DONE (BiSeq)