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INSTALL report for BUScorrect on tokay1

This page was generated on 2020-08-06 12:07:57 -0400 (Thu, 06 Aug 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE BUScorrect PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 210/1882HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BUScorrect 1.7.0
Xiangyu Luo
Snapshot Date: 2020-08-05 14:50:59 -0400 (Wed, 05 Aug 2020)
URL: https://git.bioconductor.org/packages/BUScorrect
Branch: master
Last Commit: 11ea1d9
Last Changed Date: 2020-04-27 15:18:46 -0400 (Mon, 27 Apr 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BUScorrect
Version: 1.7.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/BUScorrect_1.7.0.tar.gz && rm -rf BUScorrect.buildbin-libdir && mkdir BUScorrect.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BUScorrect.buildbin-libdir BUScorrect_1.7.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL BUScorrect_1.7.0.zip && rm BUScorrect_1.7.0.tar.gz BUScorrect_1.7.0.zip
StartedAt: 2020-08-05 17:34:20 -0400 (Wed, 05 Aug 2020)
EndedAt: 2020-08-05 17:35:06 -0400 (Wed, 05 Aug 2020)
EllapsedTime: 46.1 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/BUScorrect_1.7.0.tar.gz && rm -rf BUScorrect.buildbin-libdir && mkdir BUScorrect.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BUScorrect.buildbin-libdir BUScorrect_1.7.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL BUScorrect_1.7.0.zip && rm BUScorrect_1.7.0.tar.gz BUScorrect_1.7.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 3249k  100 3249k    0     0  48.5M      0 --:--:-- --:--:-- --:--:-- 52.8M

install for i386

* installing *source* package 'BUScorrect' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c BUS_Cfunctions.c -o BUS_Cfunctions.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o BUScorrect.dll tmp.def BUS_Cfunctions.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/BUScorrect.buildbin-libdir/00LOCK-BUScorrect/00new/BUScorrect/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BUScorrect'
    finding HTML links ... done
    BIC_BUS                                 html  
    BUScorrect-package                      html  
    BUSexample_data                         html  
    BUSgibbs                                html  
    IG_index                                html  
    Subtypes                                html  
    adjusted_values                         html  
    baseline_expression_values              html  
    calculate_EPSR_gamma                    html  
    calculate_EPSR_mu                       html  
    calculate_EPSR_sigma_sq                 html  
    estimate_IG_indicators                  html  
    location_batch_effects                  html  
    postprob_DE                             html  
    postprob_DE_thr_fun                     html  
    print.BUSfits                           html  
    scale_batch_effects                     html  
    subtype_effects                         html  
    summary.BUSfits                         html  
    visualize_data                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BUScorrect' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c BUS_Cfunctions.c -o BUS_Cfunctions.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o BUScorrect.dll tmp.def BUS_Cfunctions.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/BUScorrect.buildbin-libdir/BUScorrect/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BUScorrect' as BUScorrect_1.7.0.zip
* DONE (BUScorrect)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'BUScorrect' successfully unpacked and MD5 sums checked