Paul Shannon
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/RefNet |
| Branch: RELEASE_3_11 |
| Last Commit: 716e288 |
| Last Changed Date: 2020-04-27 14:40:10 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:35 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE RefNet PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1457/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
Paul Shannon
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | ERROR | skipped | skipped | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |
| Package: RefNet |
| Version: 1.24.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/RefNet_1.24.0.tar.gz && rm -rf RefNet.buildbin-libdir && mkdir RefNet.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RefNet.buildbin-libdir RefNet_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL RefNet_1.24.0.zip && rm RefNet_1.24.0.tar.gz RefNet_1.24.0.zip |
| StartedAt: 2020-10-16 17:44:10 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 17:45:07 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 56.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/RefNet_1.24.0.tar.gz && rm -rf RefNet.buildbin-libdir && mkdir RefNet.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RefNet.buildbin-libdir RefNet_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL RefNet_1.24.0.zip && rm RefNet_1.24.0.tar.gz RefNet_1.24.0.zip
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install for i386
* installing *source* package 'RefNet' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning message:
replacing previous import 'IRanges::desc' by 'plyr::desc' when loading 'PSICQUIC'
** help
*** installing help indices
converting help for package 'RefNet'
finding HTML links ... done
RefNet-class html
detectDuplicateInteractions html
interactions html
pickBestFromDupGroup html
providerClasses html
providers html
pubmedAbstract html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'IRanges::desc' by 'plyr::desc' when loading 'PSICQUIC'
Warning: Package 'RefNet' is deprecated and will be removed from Bioconductor
version 3.12
** testing if installed package can be loaded from final location
Warning: replacing previous import 'IRanges::desc' by 'plyr::desc' when loading 'PSICQUIC'
Warning: Package 'RefNet' is deprecated and will be removed from Bioconductor
version 3.12
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'RefNet' ...
** testing if installed package can be loaded
Warning: replacing previous import 'IRanges::desc' by 'plyr::desc' when loading 'PSICQUIC'
Warning: Package 'RefNet' is deprecated and will be removed from Bioconductor
version 3.12
* MD5 sums
packaged installation of 'RefNet' as RefNet_1.24.0.zip
* DONE (RefNet)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'RefNet' successfully unpacked and MD5 sums checked