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CHECK report for PepsNMRData on malbec1

This page was generated on 2020-04-14 17:46:30 -0400 (Tue, 14 Apr 2020).

Package 268/384HostnameOS / ArchINSTALLBUILDCHECK
PepsNMRData 1.4.0
Manon Martin
Snapshot Date: 2020-04-14 09:30:11 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/PepsNMRData
Branch: RELEASE_3_10
Last Commit: c289d3c
Last Changed Date: 2019-10-29 13:29:55 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: PepsNMRData
Version: 1.4.0
Command: /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD check --install=check:PepsNMRData.install-out.txt --library=/home/biocbuild/bbs-3.10-bioc/R/library --no-vignettes --timings PepsNMRData_1.4.0.tar.gz
StartedAt: 2020-04-14 13:56:04 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 13:56:18 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 13.8 seconds
RetCode: 0
Status:  OK 
CheckDir: PepsNMRData.Rcheck
Warnings: 0

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD check --install=check:PepsNMRData.install-out.txt --library=/home/biocbuild/bbs-3.10-bioc/R/library --no-vignettes --timings PepsNMRData_1.4.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.10-data-experiment/meat/PepsNMRData.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘PepsNMRData/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘PepsNMRData’ version ‘1.4.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘PepsNMRData’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is 57.2Mb
  sub-directories of 1Mb or more:
    data     47.8Mb
    extdata   9.3Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.10-data-experiment/meat/PepsNMRData.Rcheck/00check.log’
for details.



Installation output

PepsNMRData.Rcheck/00install.out

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### Running command:
###
###   /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD INSTALL PepsNMRData
###
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* installing to library ‘/home/biocbuild/bbs-3.10-bioc/R/library’
* installing *source* package ‘PepsNMRData’ ...
** using staged installation
** data
*** moving datasets to lazyload DB
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (PepsNMRData)

Tests output


Example timings

PepsNMRData.Rcheck/PepsNMRData-Ex.timings

nameusersystemelapsed
Data_HS_sp0.3680.0520.629
Data_HU_sp0.3960.0520.516
FidData_HS0.2080.0040.212
FidData_HU0.1560.0040.158
FidInfo_HS000
FidInfo_HS_sp000
FidInfo_HU0.0000.0040.000
FidInfo_HU_sp000
FinalSpecta_HS0.0400.0040.044
FinalSpecta_HU0.0040.0000.004
Group_HS0.0040.0000.001
Group_HU0.0000.0000.001
PEPSNMRData-package0.0040.0000.004
RawFidData_HS0.0040.0000.002