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INSTALL report for StarBioTrek on tokay1

This page was generated on 2020-04-15 12:27:31 -0400 (Wed, 15 Apr 2020).

Package 1671/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
StarBioTrek 1.12.0
Claudia Cava
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/StarBioTrek
Branch: RELEASE_3_10
Last Commit: ea1e82e
Last Changed Date: 2019-10-29 13:10:13 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: StarBioTrek
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/StarBioTrek_1.12.0.tar.gz && rm -rf StarBioTrek.buildbin-libdir && mkdir StarBioTrek.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=StarBioTrek.buildbin-libdir StarBioTrek_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL StarBioTrek_1.12.0.zip && rm StarBioTrek_1.12.0.tar.gz StarBioTrek_1.12.0.zip
StartedAt: 2020-04-14 20:30:16 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 20:31:23 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 67.1 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/StarBioTrek_1.12.0.tar.gz && rm -rf StarBioTrek.buildbin-libdir && mkdir StarBioTrek.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=StarBioTrek.buildbin-libdir StarBioTrek_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL StarBioTrek_1.12.0.zip && rm StarBioTrek_1.12.0.tar.gz StarBioTrek_1.12.0.zip
###
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100 3985k  100 3985k    0     0  10.5M      0 --:--:-- --:--:-- --:--:-- 10.6M

install for i386

* installing *source* package 'StarBioTrek' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'StarBioTrek'
    finding HTML links ... done
    ConvertedIDgenes                        html  
    Data_CANCER_normUQ_fil                  html  
    GE_matrix                               html  
    GE_matrix_mean                          html  
    GOChord                                 html  
    GetData                                 html  
    GetPathData                             html  
    GetPathNet                              html  
    IPPI                                    html  
    SelectedSample                          html  
    StarBioTrek                             html  
    average                                 html  
    circleplot                              html  
    dsscorecrtlk                            html  
    eucdistcrtlk                            html  
    getNETdata                              html  
    listpathnet                             html  
    netw                                    html  
    netw_IPPI                               html  
    norm                                    html  
    path                                    html  
    path_KEGG                               html  
    pathnet                                 html  
    pathway                                 html  
    pathway_matrix                          html  
    plotcrosstalk                           html  
    score_euc_dista                         html  
    select_class                            html  
    stdv                                    html  
    svm_classification                      html  
    tumo                                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'StarBioTrek' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'StarBioTrek' as StarBioTrek_1.12.0.zip
* DONE (StarBioTrek)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'StarBioTrek' successfully unpacked and MD5 sums checked