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BioC 3.0: BUILD report for AnnotationForge on oaxaca

This page was generated on 2015-04-10 10:06:09 -0700 (Fri, 10 Apr 2015).

Package 41/933HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AnnotationForge 1.8.2
Bioconductor Package Maintainer
Snapshot Date: 2015-04-09 16:20:12 -0700 (Thu, 09 Apr 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_0/madman/Rpacks/AnnotationForge
Last Changed Rev: 98632 / Revision: 102249
Last Changed Date: 2015-01-23 13:38:37 -0800 (Fri, 23 Jan 2015)
zin1 Linux (Ubuntu 12.04.4 LTS) / x86_64  OK  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK  OK 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK  OK 
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK [ OK ] OK  OK 

Summary

Package: AnnotationForge
Version: 1.8.2
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data AnnotationForge
StartedAt: 2015-04-09 19:19:36 -0700 (Thu, 09 Apr 2015)
EndedAt: 2015-04-09 19:24:50 -0700 (Thu, 09 Apr 2015)
EllapsedTime: 314.0 seconds
RetCode: 0
Status:  OK 
PackageFile: AnnotationForge_1.8.2.tar.gz
PackageFileSize: 10.21 MiB

Command output

##############################################################################
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###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data AnnotationForge
###
##############################################################################
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* checking for file ‘AnnotationForge/DESCRIPTION’ ... OK
* preparing ‘AnnotationForge’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/BASEPKG.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/COELICOLOR.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/GO.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/INPARANOID.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/KEGG.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/MALARIA.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NCBICHIP.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NCBIORG.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NOCHIPSCHEMA.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NOSCHEMA.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ORGANISM.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/PFAM.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/YEAST.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/YEASTCHIP.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/YEASTNCBI.DB/inst/extdata’ is empty
* building ‘AnnotationForge_1.8.2.tar.gz’