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hapmap100kxba 1.3.5
Benilton Carvalho
Snapshot Date: 2012-03-23 11:15:09 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/hapmap100kxba
Last Changed Rev: 2028 / Revision: 2028
Last Changed Date: 2012-03-23 08:16:04 -0700 (Fri, 23 Mar 2012)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: hapmap100kxba
Version: 1.3.5
Command: rm -rf hapmap100kxba.buildbin-libdir && mkdir hapmap100kxba.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=hapmap100kxba.buildbin-libdir hapmap100kxba_1.3.5.tar.gz >hapmap100kxba-install.out 2>&1 && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --library=hapmap100kxba.buildbin-libdir --install="check:hapmap100kxba-install.out" --force-multiarch --no-vignettes --timings hapmap100kxba_1.3.5.tar.gz && mv hapmap100kxba.buildbin-libdir/* hapmap100kxba.Rcheck/ && rmdir hapmap100kxba.buildbin-libdir
StartedAt: 2012-03-23 14:19:00 -0700 (Fri, 23 Mar 2012)
EndedAt: 2012-03-23 14:22:18 -0700 (Fri, 23 Mar 2012)
EllapsedTime: 197.2 seconds
RetCode: 0
Status:  OK  
CheckDir: hapmap100kxba.Rcheck
Warnings: 0

Command output

* using log directory 'D:/biocbld/bbs-2.9-data-experiment/meat/hapmap100kxba.Rcheck'
* using R version 2.14.2 (2012-02-29)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'hapmap100kxba/DESCRIPTION' ... OK
* this is package 'hapmap100kxba' version '1.3.5'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'hapmap100kxba' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 73.5Mb
  sub-directories of 1Mb or more:
    celFiles  73.4Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
File 'hapmap100kxba/R/zzz.R':
  .onLoad calls:
    message(paste("/-------------------------------------------\\",     "|         SAMPLE HAPMAP 100K XBA            |", "|-------------------------------------------|",     "| Data obtained from http://www.hapmap.org  |", "| This package is meant to be used only for |",     "| demonstration of BioConductor packages.   |", "| Access http://www.hapmap.org for details. |",     "|-------------------------------------------|", "| The contents of this package are provided |",     "| in good faith and the maintainer does not |", "| warrant their accuracy.                   |",     "\\-------------------------------------------/", sep = "\n"))

Package startup functions should use 'packageStartupMessage' to
  generate messages.
See section 'Good practice' in ?.onAttach.

* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking PDF version of manual ... OK

hapmap100kxba.Rcheck/00install.out:


install for i386

* installing *source* package 'hapmap100kxba' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
/-------------------------------------------\
|         SAMPLE HAPMAP 100K XBA            |
|-------------------------------------------|
| Data obtained from http://www.hapmap.org  |
| This package is meant to be used only for |
| demonstration of BioConductor packages.   |
| Access http://www.hapmap.org for details. |
|-------------------------------------------|
| The contents of this package are provided |
| in good faith and the maintainer does not |
| warrant their accuracy.                   |
\-------------------------------------------/

add DLL for x64

* installing *source* package 'hapmap100kxba' ...
** testing if installed package can be loaded
/-------------------------------------------\
|         SAMPLE HAPMAP 100K XBA            |
|-------------------------------------------|
| Data obtained from http://www.hapmap.org  |
| This package is meant to be used only for |
| demonstration of BioConductor packages.   |
| Access http://www.hapmap.org for details. |
|-------------------------------------------|
| The contents of this package are provided |
| in good faith and the maintainer does not |
| warrant their accuracy.                   |
\-------------------------------------------/
* MD5 sums
packaged installation of 'hapmap100kxba' as hapmap100kxba_1.3.5.zip

* DONE (hapmap100kxba)