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Package 158/514HostnameOS / ArchBUILDCHECKBUILD BIN
externalVector 1.20.0
Bioconductor Package Maintainer
Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/externalVector
Last Changed Rev: 59920 / Revision: 64395
Last Changed Date: 2011-10-31 15:59:03 -0700 (Mon, 31 Oct 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: externalVector
Version: 1.20.0
Command: rm -rf externalVector.buildbin-libdir && mkdir externalVector.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=externalVector.buildbin-libdir externalVector_1.20.0.tar.gz
StartedAt: 2012-03-24 03:41:13 -0700 (Sat, 24 Mar 2012)
EndedAt: 2012-03-24 03:41:52 -0700 (Sat, 24 Mar 2012)
EllapsedTime: 39.1 seconds
RetCode: 0
Status:  OK  
PackageFile: externalVector_1.20.0.zip
PackageFileSize: 573 KiB

Command output


install for i386

* installing *source* package 'externalVector' ...
** libs
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c allocator.c -o allocator.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c arraySummary.c -o arraySummary.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c coerce.c -o coerce.o
coerce.c: In function 'ComplexFromString':
coerce.c:213:18: warning: initialization from incompatible pointer type [enabled by default]
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c externalVector.c -o externalVector.o
externalVector.c:6:1: warning: 'ScalarVector' defined but not used [-Wunused-function]
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c groups.c -o groups.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c math.c -o math.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c slice.c -o slice.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c storage.c -o storage.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c subscript.c -o subscript.o
subscript.c: In function 'SubscriptList':
subscript.c:402:9: warning: variable 'n' set but not used [-Wunused-but-set-variable]
gcc -shared -s -static-libgcc -o externalVector.dll tmp.def allocator.o arraySummary.o coerce.o externalVector.o groups.o math.o slice.o storage.o subscript.o -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/externalVector.buildbin-libdir/externalVector/libs/i386
** R
** preparing package for lazy loading
Creating a generic function for 'match' from package 'base' in package 'externalVector'
Creating a generic function for 'as.vector' from package 'base' in package 'externalVector'
Creating a generic function for 'as.single' from package 'base' in package 'externalVector'
Creating a generic function for 'as.list' from package 'base' in package 'externalVector'
Creating a generic function for 'as.matrix' from package 'base' in package 'externalVector'
Creating a generic function for 'as.data.frame' from package 'base' in package 'externalVector'
Creating a generic function for 'colSums' from package 'base' in package 'externalVector'
Creating a generic function for 'colMeans' from package 'base' in package 'externalVector'
Creating a generic function for 'rowSums' from package 'base' in package 'externalVector'
Creating a generic function for 'rowMeans' from package 'base' in package 'externalVector'
Creating a generic function for 'apply' from package 'base' in package 'externalVector'
Creating a generic function for 'lapply' from package 'base' in package 'externalVector'
Creating a generic function for 'sapply' from package 'base' in package 'externalVector'
Creating a generic function for 'mean' from package 'base' in package 'externalVector'
Creating a generic function for 'median' from package 'stats' in package 'externalVector'
Creating a new generic function for 'var' in package 'externalVector'
Creating a new generic function for 'cov' in package 'externalVector'
Creating a new generic function for 'cor' in package 'externalVector'
Creating a generic function for 'cov2cor' from package 'stats' in package 'externalVector'
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

add DLL for x64

* installing *source* package 'externalVector' ...
** libs
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c allocator.c -o allocator.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c arraySummary.c -o arraySummary.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c coerce.c -o coerce.o
coerce.c: In function 'ComplexFromString':
coerce.c:213:18: warning: initialization from incompatible pointer type [enabled by default]
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c externalVector.c -o externalVector.o
externalVector.c:6:1: warning: 'ScalarVector' defined but not used [-Wunused-function]
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c groups.c -o groups.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c math.c -o math.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c slice.c -o slice.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c storage.c -o storage.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c subscript.c -o subscript.o
subscript.c: In function 'SubscriptList':
subscript.c:402:9: warning: variable 'n' set but not used [-Wunused-but-set-variable]
gcc -m64 -shared -s -static-libgcc -o externalVector.dll tmp.def allocator.o arraySummary.o coerce.o externalVector.o groups.o math.o slice.o storage.o subscript.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/externalVector.buildbin-libdir/externalVector/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'externalVector' as externalVector_1.20.0.zip

* DONE (externalVector)