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Package 30/514HostnameOS / ArchBUILDCHECKBUILD BIN
altcdfenvs 2.16.0
Laurent Gautier
Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/altcdfenvs
Last Changed Rev: 59920 / Revision: 64395
Last Changed Date: 2011-10-31 15:59:03 -0700 (Mon, 31 Oct 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK [ OK ]

Summary

Package: altcdfenvs
Version: 2.16.0
Command: rm -rf altcdfenvs.buildbin-libdir && mkdir altcdfenvs.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh altcdfenvs_2.16.0.tar.gz /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R altcdfenvs.buildbin-libdir
StartedAt: 2012-03-24 05:03:16 -0700 (Sat, 24 Mar 2012)
EndedAt: 2012-03-24 05:03:33 -0700 (Sat, 24 Mar 2012)
EllapsedTime: 17.4 seconds
RetCode: 0
Status:  OK 
PackageFile: altcdfenvs_2.16.0.tgz
PackageFileSize: 514.9 KiB

Command output

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=altcdfenvs.buildbin-libdir altcdfenvs_2.16.0.tar.gz'
>>>>>>> 

* installing *source* package 'altcdfenvs' ...
** R
** data
** inst
** preparing package for lazy loading
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "connection" in package 'graph' seems equivalent to one from package 'IRanges' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "file" in package 'graph' seems equivalent to one from package 'IRanges' and is not turning on duplicate class definitions for this class
NOTE: arguments in definition for validity method for class 'AffyProbesMatch' changed from (obj) to (object)
in method for 'toHypergraph' with signature '"CdfEnvAffy"': no definition for class "CdfEnvAffy"
Creating a generic function for 'plot' from package 'graphics' in package 'altcdfenvs'
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'altcdfenvs.Rnw' 
   'modify.Rnw' 
   'ngenomeschips.Rnw' 
** testing if installed package can be loaded

* DONE (altcdfenvs)