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Package 348/514HostnameOS / ArchBUILDCHECKBUILD BIN
OLIN 1.32.0
Matthias Futschik
Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/OLIN
Last Changed Rev: 59920 / Revision: 64395
Last Changed Date: 2011-10-31 15:59:03 -0700 (Mon, 31 Oct 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 

Summary

Package: OLIN
Version: 1.32.0
Command: /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch OLIN_1.32.0.tar.gz
StartedAt: 2012-03-24 02:54:54 -0700 (Sat, 24 Mar 2012)
EndedAt: 2012-03-24 02:57:19 -0700 (Sat, 24 Mar 2012)
EllapsedTime: 145.1 seconds
RetCode: 0
Status:  OK 
CheckDir: OLIN.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.9-bioc/meat/OLIN.Rcheck'
* using R version 2.14.2 (2012-02-29)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'OLIN/DESCRIPTION' ... OK
* this is package 'OLIN' version '1.32.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'OLIN' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... NOTE
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                old_size new_size compress
  sw.RData         292Kb    213Kb       xz
  sw.olin.RData    295Kb    259Kb       xz
  sw.xy.RData       35Kb     20Kb       xz
* checking sizes of PDF files under 'inst/doc' ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

OLIN.Rcheck/00install.out:

* installing *source* package 'OLIN' ...
** R
** data
** inst
** preparing package for lazy loading
locfit 1.5-6 	 2010-01-20 
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'OLIN.Rnw' 
** testing if installed package can be loaded
locfit 1.5-6 	 2010-01-20 

* DONE (OLIN)

OLIN.Rcheck/OLIN-Ex.timings:

nameusersystemelapsed
anovaint0.3810.0700.454
anovapin0.2720.0510.330
anovaplate0.2120.0490.273
anovaspatial0.7380.1310.881
backgroundCorrect21.0610.1971.284
bas0.1090.0170.127
colorbar.mxy0.1120.0260.139
fdr.int0.0010.0000.000
fdr.int20.0000.0000.001
fdr.spatial000
fdr.spatial20.0000.0000.001
fgbg.visu0.2210.0410.269
ino0.6460.1630.830
lin1.8280.4042.311
m2v0.1280.0240.153
ma.matrix0.5780.0320.618
ma.vector0.7240.0550.786
mxy.abs.plot0.2440.0410.293
mxy.plot0.1730.0460.219
mxy2.plot0.1310.0230.157
oin2.4170.4572.954
olin51.519 5.55859.271
p.int0.0000.0000.001
p.int20.0000.0010.000
p.spatial0.0000.0000.001
p.spatial20.0000.0010.000
sig.mask0.0000.0000.001
sigint.plot0.0000.0010.000
sigint.plot2000
sigxy.plot0.0000.0010.001
sigxy.plot20.0000.0000.001
v2m0.0900.0110.104