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Package 323/514HostnameOS / ArchBUILDCHECKBUILD BIN
MLInterfaces 1.34.2
V. Carey
Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/MLInterfaces
Last Changed Rev: 61578 / Revision: 64395
Last Changed Date: 2011-12-27 13:10:30 -0800 (Tue, 27 Dec 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK [ OK ]
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: MLInterfaces
Version: 1.34.2
Command: /home/biocbuild/bbs-2.9-bioc/R/bin/R CMD check --no-vignettes --timings MLInterfaces_1.34.2.tar.gz
StartedAt: 2012-03-24 01:34:13 -0700 (Sat, 24 Mar 2012)
EndedAt: 2012-03-24 01:38:04 -0700 (Sat, 24 Mar 2012)
EllapsedTime: 230.2 seconds
RetCode: 0
Status:  OK 
CheckDir: MLInterfaces.Rcheck
Warnings: 0

Command output

* using log directory ‘/loc/home/biocbuild/bbs-2.9-bioc/meat/MLInterfaces.Rcheck’
* using R version 2.14.2 (2012-02-29)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘MLInterfaces/DESCRIPTION’ ... OK
* this is package ‘MLInterfaces’ version ‘1.34.2’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘MLInterfaces’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: MLIntInternals.Rd:40-41: Dropping empty section \examples
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

MLInterfaces.Rcheck/00install.out:

* installing *source* package ‘MLInterfaces’ ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   ‘MLInterfaces.Rnw’ 
   ‘MLint_devel.Rnw’ 
   ‘MLprac2_2.Rnw’ 
   ‘xvalComputerClusters.Rnw’ 
** testing if installed package can be loaded

* DONE (MLInterfaces)

MLInterfaces.Rcheck/MLInterfaces-Ex.timings:

nameusersystemelapsed
MLearn-new24.306 0.32024.901
RAB0.1720.0040.177
balKfold.xvspec0.0120.0000.010
classifierOutput-class4.0560.0084.069
clusteringOutput-class0.0000.0000.001
confuMat-methods0.4760.0160.492
fs.absT0.020.000.02
fsHistory0.1120.0040.122
learnerSchema-class000
planarPlot-methods2.9200.1203.053
predict.classifierOutput4.1040.0124.129
raboostCont-class0.0000.0000.002
varImpStruct-class1.1080.0281.142
xvalLoop000
xvalSpec0.2200.0000.223