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Package 219/514HostnameOS / ArchBUILDCHECKBUILD BIN
GLAD 2.16.2
Philippe Hupe
Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/GLAD
Last Changed Rev: 63416 / Revision: 64395
Last Changed Date: 2012-03-03 12:36:11 -0800 (Sat, 03 Mar 2012)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: GLAD
Version: 2.16.2
Command: rm -rf GLAD.buildbin-libdir && mkdir GLAD.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=GLAD.buildbin-libdir GLAD_2.16.2.tar.gz
StartedAt: 2012-03-24 03:46:50 -0700 (Sat, 24 Mar 2012)
EndedAt: 2012-03-24 03:48:13 -0700 (Sat, 24 Mar 2012)
EllapsedTime: 82.3 seconds
RetCode: 0
Status:  OK  
PackageFile: GLAD_2.16.2.zip
PackageFileSize: 1.753 MiB

Command output


install for i386

* installing *source* package 'GLAD' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O2 -Wall  -mtune=core2 -c BkpInfo.cpp -o BkpInfo.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O2 -Wall  -mtune=core2 -c HaarSeg.cpp -o HaarSeg.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O2 -Wall  -mtune=core2 -c MoveBkp.cpp -o MoveBkp.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O2 -Wall  -mtune=core2 -c OutliersGNL.cpp -o OutliersGNL.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O2 -Wall  -mtune=core2 -c chrBreakpoints.cpp -o chrBreakpoints.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O2 -Wall  -mtune=core2 -c cutree.cpp -o cutree.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O2 -Wall  -mtune=core2 -c daglad.cpp -o daglad.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O2 -Wall  -mtune=core2 -c distance.cpp -o distance.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O2 -Wall  -mtune=core2 -c filterBkp.cpp -o filterBkp.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O2 -Wall  -mtune=core2 -c findCluster.cpp -o findCluster.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O2 -Wall  -mtune=core2 -c glad-utils.cpp -o glad-utils.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O2 -Wall  -mtune=core2 -c hclust.cpp -o hclust.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O3 -Wall  -std=gnu99 -mtune=core2 -c laws.c -o laws.o
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include         -O2 -Wall  -mtune=core2 -c loopRemove.cpp -o loopRemove.o
g++ -shared -s -static-libgcc -o GLAD.dll tmp.def BkpInfo.o HaarSeg.o MoveBkp.o OutliersGNL.o chrBreakpoints.o cutree.o daglad.o distance.o filterBkp.o findCluster.o glad-utils.o hclust.o laws.o loopRemove.o -LC:/GSL/i386/lib -lgsl -lgslcblas -lm -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/GLAD.buildbin-libdir/GLAD/libs/i386
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'GLAD.Rnw' 
** testing if installed package can be loaded

add DLL for x64

* installing *source* package 'GLAD' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c BkpInfo.cpp -o BkpInfo.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c HaarSeg.cpp -o HaarSeg.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c MoveBkp.cpp -o MoveBkp.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c OutliersGNL.cpp -o OutliersGNL.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c chrBreakpoints.cpp -o chrBreakpoints.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c cutree.cpp -o cutree.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c daglad.cpp -o daglad.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c distance.cpp -o distance.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c filterBkp.cpp -o filterBkp.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c findCluster.cpp -o findCluster.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c glad-utils.cpp -o glad-utils.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c hclust.cpp -o hclust.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c laws.c -o laws.o
g++ -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/x64/include    -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c loopRemove.cpp -o loopRemove.o
g++ -m64 -shared -s -static-libgcc -o GLAD.dll tmp.def BkpInfo.o HaarSeg.o MoveBkp.o OutliersGNL.o chrBreakpoints.o cutree.o daglad.o distance.o filterBkp.o findCluster.o glad-utils.o hclust.o laws.o loopRemove.o -LC:/GSL/x64/lib -lgsl -lgslcblas -lm -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/GLAD.buildbin-libdir/GLAD/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GLAD' as GLAD_2.16.2.zip

* DONE (GLAD)