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Package 2/479HostnameOS / ArchBUILDCHECKBUILD BIN
a4Base 1.1.3
Tobias Verbeke
Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/a4Base
Last Changed Rev: 55770 / Revision: 56603
Last Changed Date: 2011-05-21 07:15:35 -0700 (Sat, 21 May 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  ERROR [ OK ]
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  ERROR  ERROR 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: a4Base
Version: 1.1.3
Command: mkdir a4Base.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --no-multiarch --library=a4Base.buildbin-libdir a4Base_1.1.3.tar.gz
StartedAt: 2011-07-07 06:47:47 -0700 (Thu, 07 Jul 2011)
EndedAt: 2011-07-07 06:48:06 -0700 (Thu, 07 Jul 2011)
EllapsedTime: 18.9 seconds
RetCode: 0
Status:  OK  
PackageFile: a4Base_1.1.3.zip
PackageFileSize: 447 KiB

Command output

* installing *source* package 'a4Base' ...
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Loading required package: GO.db
Loading required package: DBI

Loading required package: KEGG.db

Loading required package: MASS
Loading required package: KernSmooth
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009

mpm version 1.0-17


Attaching package: 'genefilter'

The following object(s) are masked from 'package:MASS':

    area

Loading required package: Matrix
Loading required package: lattice

Attaching package: 'Matrix'

The following object(s) are masked from 'package:base':

    det

Loaded glmnet 1.7 

Attaching package: 'a4Core'

The following object(s) are masked from 'package:limma':

    topTable

Loading required package: gtools
Loading required package: gdata
File type 'perl' not found or no open command associated with it.
Warning: running command 'C:\Windows\system32\cmd.exe /c ftype perl' had status 2
File type 'perl' not found or no open command associated with it.
Warning: running command 'C:\Windows\system32\cmd.exe /c ftype perl' had status 2
gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.

gdata: Unable to load perl libaries needed by read.xls()
gdata: to support 'XLSX' (Excel 2007+) files.

gdata: Run the function 'installXLSXsupport()'
gdata: to automatically download and install the perl
gdata: libaries needed to support Excel XLS and XLSX formats.

Attaching package: 'gdata'

The following object(s) are masked from 'package:Biobase':

    combine

The following object(s) are masked from 'package:stats':

    nobs

The following object(s) are masked from 'package:utils':

    object.size

Loading required package: caTools
Loading required package: bitops

Attaching package: 'gplots'

The following object(s) are masked from 'package:multtest':

    wapply

The following object(s) are masked from 'package:stats':

    lowess

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

mpm version 1.0-17

Loaded glmnet 1.7 
File type 'perl' not found or no open command associated with it.
File type 'perl' not found or no open command associated with it.

a4Base version 1.1.3

Warning messages:
1: running command 'C:\Windows\system32\cmd.exe /c ftype perl' had status 2 
2: running command 'C:\Windows\system32\cmd.exe /c ftype perl' had status 2 
* MD5 sums
packaged installation of 'a4Base' as a4Base_1.1.3.zip

* DONE (a4Base)