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Package 103/479HostnameOS / ArchBUILDCHECKBUILD BIN
CoCiteStats 1.25.0
Biocore Team c/o BioC user list
Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CoCiteStats
Last Changed Rev: 54802 / Revision: 56603
Last Changed Date: 2011-04-13 15:36:43 -0700 (Wed, 13 Apr 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: CoCiteStats
Version: 1.25.0
Command: mkdir CoCiteStats.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=CoCiteStats.buildbin-libdir CoCiteStats_1.25.0.tar.gz >CoCiteStats-install.out 2>&1 && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --library=CoCiteStats.buildbin-libdir --install="check:CoCiteStats-install.out" --force-multiarch --no-vignettes --timings CoCiteStats_1.25.0.tar.gz && mv CoCiteStats.buildbin-libdir/* CoCiteStats.Rcheck/ && rmdir CoCiteStats.buildbin-libdir
StartedAt: 2011-07-07 04:41:53 -0700 (Thu, 07 Jul 2011)
EndedAt: 2011-07-07 04:46:36 -0700 (Thu, 07 Jul 2011)
EllapsedTime: 283.5 seconds
RetCode: 0
Status:  OK  
CheckDir: CoCiteStats.Rcheck
Warnings: 0

Command output

* using log directory 'D:/biocbld/bbs-2.9-bioc/meat/CoCiteStats.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-06-20 r56188)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'CoCiteStats/DESCRIPTION' ... OK
* this is package 'CoCiteStats' version '1.25.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'CoCiteStats' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the name space can be loaded with stated dependencies ... OK
** checking whether the name space can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the name space can be loaded with stated dependencies ... OK
** checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: gene.geneslist.statistic.Rd:19-21: Dropping empty section \details
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking PDF version of manual ... OK

CoCiteStats.Rcheck/00install.out:


install for i386

* installing *source* package 'CoCiteStats' ...
** R
** preparing package for lazy loading
Loading required package: AnnotationDbi
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Loading required package: DBI

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

add DLL for x64

* installing *source* package 'CoCiteStats' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CoCiteStats' as CoCiteStats_1.25.0.zip

* DONE (CoCiteStats)

CoCiteStats.Rcheck/CoCiteStats-Ex.timings:

nameusersystemelapsed
actorAdjTable24.25 0.6225.36
gene.gene.statistic13.95 0.1714.12
gene.geneslist.sig19.09 0.1919.28
gene.geneslist.statistic17.21 0.1617.36
paperLen13.68 0.0313.71
twTStats13.51 0.0613.58
twowayTable12.24 0.0812.32