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leeBamViews 0.99.12
VJ Carey
Snapshot Date: 2011-10-18 23:15:16 -0700 (Tue, 18 Oct 2011)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/leeBamViews
Last Changed Rev: 1741 / Revision: 1763
Last Changed Date: 2011-10-02 17:04:51 -0700 (Sun, 02 Oct 2011)
lamb1 Linux (openSUSE 11.3) / x86_64  ERROR  skipped 
gewurz Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 [ ERROR ] skipped  skipped 
pelham Mac OS X Leopard (10.5.8) / i386  ERROR  skipped  skipped 

Summary

Package: leeBamViews
Version: 0.99.12
Command: chmod a+r leeBamViews -R && D:\biocbld\bbs-2.8-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data leeBamViews
StartedAt: 2011-10-19 01:58:31 -0700 (Wed, 19 Oct 2011)
EndedAt: 2011-10-19 02:01:05 -0700 (Wed, 19 Oct 2011)
EllapsedTime: 154.5 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'leeBamViews/DESCRIPTION' ... OK
* preparing 'leeBamViews':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Loading required package: Rsamtools
Loading required package: IRanges

Attaching package: 'IRanges'

The following object(s) are masked from 'package:Biobase':

    updateObject

The following object(s) are masked from 'package:base':

    Map, cbind, eval, intersect, mapply, order, paste, pmax, pmax.int,
    pmin, pmin.int, rbind, rep.int, setdiff, table, union

Loading required package: GenomicRanges
Loading required package: Biostrings
Loading required package: BSgenome
Loading required package: biomaRt
Loading required package: grid
NULL
Loading required package: AnnotationDbi
Loading required package: DBI

Warning in min(A[!w]) : no non-missing arguments to min; returning Inf
Warning in min(y[!w]) : no non-missing arguments to min; returning Inf
Warning in min(x[!w]) : no non-missing arguments to min; returning Inf
Warning in min(x) : no non-missing arguments to min; returning Inf
Warning in max(x) : no non-missing arguments to max; returning -Inf

Error: processing vignette 'leeViews.Rnw' failed with diagnostics:
 chunk 14 (label = lkma) 
Error in plot.window(...) : need finite 'xlim' values
Execution halted