Package: MLInterfaces

Version: 1.32.0

Command: D:\biocbld\bbs-2.8-bioc\R\bin\R.exe CMD check --no-vignettes --timings --no-multiarch MLInterfaces_1.32.0.tar.gz

StartedAt: 2011-10-20 15:29:38 -0700 (Thu, 20 Oct 2011)

EndedAt: 2011-10-20 15:32:23 -0700 (Thu, 20 Oct 2011)

EllapsedTime: 164.9 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: MLInterfaces.Rcheck

Warnings: 1

* using log directory 'D:/biocbld/bbs-2.8-bioc/meat/MLInterfaces.Rcheck'
* using R version 2.13.2 (2011-09-30)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'MLInterfaces/DESCRIPTION' ... OK
* this is package 'MLInterfaces' version '1.32.0'
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Package which this enhances but not available for checking: multicore
* checking if this is a source package ... OK
* checking whether package 'MLInterfaces' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: MLIntInternals.Rd:40-41: Dropping empty section \examples
* checking Rd metadata ... OK
* checking Rd cross-references ... NOTE
Package(s) unavailable to check Rd xrefs: 'multicore'
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... NOTE
'library' or 'require' call not declared from: lattice
* checking package vignettes in 'inst/doc' ... WARNING
Package vignette(s) without corresponding PDF:
   MLInterfaces.Rnw
   MLint_devel.Rnw
   MLprac2_2.Rnw
   xvalComputerClusters.Rnw

* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

WARNING: There was 1 warning, see
  'D:/biocbld/bbs-2.8-bioc/meat/MLInterfaces.Rcheck/00check.log'
for details

* installing *source* package 'MLInterfaces' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (MLInterfaces)

name	user	system	elapsed
MLearn-new	23.10	0.17	24.25
RAB	0.19	0.00	0.19
balKfold.xvspec	0.00	0.01	0.01
classifierOutput-class	4.17	0.00	4.18
clusteringOutput-class	0	0	0
confuMat-methods	0.37	0.00	0.37
fs.absT	0.03	0.00	0.03
fsHistory	0.11	0.00	0.11
learnerSchema-class	0	0	0
planarPlot-methods	3.41	0.08	3.49
raboostCont-class	0	0	0
varImpStruct-class	0.72	0.02	0.73
xvalLoop	0	0	0
xvalSpec	0.17	0.00	0.17