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Package 39/83HostnameOS / ArchBUILDCHECKBUILD BIN
hapmapsnp5 1.3.3
Benilton Carvalho
Snapshot Date: 2010-09-24 00:28:34 -0700 (Fri, 24 Sep 2010)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/hapmapsnp5
Last Changed Rev: 1030 / Revision: 1309
Last Changed Date: 2009-10-06 16:54:25 -0700 (Tue, 06 Oct 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: hapmapsnp5
Version: 1.3.3
Command: /home/biocbuild/bbs-2.6-bioc/R/bin/R CMD check --no-vignettes --timings hapmapsnp5_1.3.3.tar.gz
StartedAt: 2010-09-24 02:41:45 -0700 (Fri, 24 Sep 2010)
EndedAt: 2010-09-24 02:42:11 -0700 (Fri, 24 Sep 2010)
EllapsedTime: 26.5 seconds
RetCode: 0
Status:  OK 
CheckDir: hapmapsnp5.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.6-data-experiment/meat/hapmapsnp5.Rcheck'
* using R version 2.11.1 (2010-05-31)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'hapmapsnp5/DESCRIPTION' ... OK
* this is package 'hapmapsnp5' version '1.3.3'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'hapmapsnp5' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

hapmapsnp5.Rcheck/00install.out:

* install options are ' --no-html'

* installing *source* package 'hapmapsnp5' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
/-------------------------------------------\
|         SAMPLE HAPMAP SNP 5.0             |
|-------------------------------------------|
| Data obtained from http://www.hapmap.org  |
| This package is meant to be used only for |
| demonstration of BioConductor packages.   |
| Access http://www.hapmap.org for details. |
|-------------------------------------------|
| The contents of this package are provided |
| in good faith and the maintainer does not |
| warrant their accuracy.                   |
\-------------------------------------------/

* DONE (hapmapsnp5)

hapmapsnp5.Rcheck/hapmapsnp5-Ex.timings:

nameusersystemelapsed
hapmapsnp5-package000