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encoDnaseI 0.1-4
VJ Carey
Snapshot Date: 2010-09-24 00:28:34 -0700 (Fri, 24 Sep 2010)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/encoDnaseI
Last Changed Rev: 1023 / Revision: 1309
Last Changed Date: 2009-10-01 09:11:52 -0700 (Thu, 01 Oct 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  WARNINGS 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] WARNINGS  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS  OK 

Summary

Package: encoDnaseI
Version: 0.1-4
Command: chmod a+r encoDnaseI -R && E:\biocbld\bbs-2.6-bioc\R\bin\R.exe CMD build encoDnaseI
StartedAt: 2010-09-24 03:11:51 -0700 (Fri, 24 Sep 2010)
EndedAt: 2010-09-24 03:14:57 -0700 (Fri, 24 Sep 2010)
EllapsedTime: 186.3 seconds
RetCode: 0
Status:  OK  
PackageFile: encoDnaseI_0.1-4.tar.gz
PackageFileSize: 8.24 MiB

Command output

* checking for file 'encoDnaseI/DESCRIPTION' ... OK
* preparing 'encoDnaseI':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* installing *source* package 'encoDnaseI' ...
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: GGBase
Loading required package: GSEABase
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: graph
Loading required package: snpMatrix
Loading required package: survival
Loading required package: splines
Loading required package: RSQLite
Loading required package: DBI
Loading required package: ff
Loading required package: tools
Loading required package: bit
Loading package bit1.1-4

package:bit (c) 2008/2009 Jens Oehlschlaegel (GPL-2)

creators: bit bitwhich

coercion: as.logical as.integer as.bit as.bitwhich which

operator: ! & | xor != == 

querying: print length any all min max range sum summary

bit access: length<- [ [<- [[ [[<-

for more help type ?bit


Attaching package: 'bit'

The following object(s) are masked from 'package:base':

    xor

Loading package ff 2.1-2 
- getOption("fftempdir")=="E:/biocbld/bbs-2.6-data-experiment/tmpdir/Rtmplvf5mC"
- getOption("ffextension")=="ff"
- getOption("ffdrop")==TRUE
- getOption("fffinonexit")==TRUE
- getOption("ffpagesize")==65536
- getOption("ffcaching")=="mmnoflush"  -- consider "ffeachflush" if your system stalls on large writes
- getOption("ffbatchbytes")==16095641 -- consider a different value for tuning your system
Attaching package ff

Attaching package: 'ff'

The following object(s) are masked from 'package:utils':

    write.csv, write.csv2

The following object(s) are masked from 'package:base':

    is.factor, is.ordered

Loading required package: IRanges

Attaching package: 'IRanges'

The following object(s) are masked from 'package:Biobase':

    updateObject

The following object(s) are masked from 'package:base':

    Map, cbind, mapply, order, paste, pmax, pmax.int, pmin, pmin.int,
    rbind, rep.int, table

Loading required package: rtracklayer
Loading required package: RCurl
Loading required package: bitops
Loading required package: multtest
Loading required package: org.Hs.eg.db
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (encoDnaseI)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'encoDnaseI_0.1-4.tar.gz'