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Package 160/389HostnameOS / ArchBUILDCHECKBUILD BIN
GenomicRanges 1.0.9
Biocore Team c/o BioC user list
Snapshot Date: 2010-10-04 11:22:20 -0700 (Mon, 04 Oct 2010)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_6/madman/Rpacks/GenomicRanges
Last Changed Rev: 49071 / Revision: 49923
Last Changed Date: 2010-08-27 19:20:48 -0700 (Fri, 27 Aug 2010)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK [ OK ]
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: GenomicRanges
Version: 1.0.9
Command: E:\biocbld\bbs-2.6-bioc\R\bin\R.exe CMD INSTALL --build --library=GenomicRanges.buildbin-libdir GenomicRanges_1.0.9.tar.gz
StartedAt: 2010-10-04 20:54:27 -0700 (Mon, 04 Oct 2010)
EndedAt: 2010-10-04 20:54:43 -0700 (Mon, 04 Oct 2010)
EllapsedTime: 16.1 seconds
RetCode: 0
Status:  OK  
PackageFile: GenomicRanges_1.0.9.zip
PackageFileSize: 1.556 MiB

Command output

* installing *source* package 'GenomicRanges' ...
** libs
  making DLL ...
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include"   -I"E:/biocbld/bbs-2.6-bioc/R/library/IRanges/include"      -O3 -Wall  -std=gnu99 -c IRanges_stubs.c -o IRanges_stubs.o
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include"   -I"E:/biocbld/bbs-2.6-bioc/R/library/IRanges/include"      -O3 -Wall  -std=gnu99 -c R_init_GenomicRanges.c -o R_init_GenomicRanges.o
gcc -I"E:/biocbld/bbs-2.6-bioc/R/include"   -I"E:/biocbld/bbs-2.6-bioc/R/library/IRanges/include"      -O3 -Wall  -std=gnu99 -c cigar_utils.c -o cigar_utils.o
cigar_utils.c: In function 'cigar_narrow':
cigar_utils.c:500: warning: 'OPL' may be used uninitialized in this function
cigar_utils.c:500: note: 'OPL' was declared here
cigar_utils.c:501: warning: 'OP' may be used uninitialized in this function
cigar_utils.c:501: note: 'OP' was declared here
cigar_utils.c: In function 'cigar_qnarrow':
cigar_utils.c:340: warning: 'OPL' may be used uninitialized in this function
cigar_utils.c:340: note: 'OPL' was declared here
cigar_utils.c:341: warning: 'OP' may be used uninitialized in this function
cigar_utils.c:341: note: 'OP' was declared here
cigar_utils.c: In function 'cigar_to_width':
cigar_utils.c:897: warning: 'width' may be used uninitialized in this function
cigar_utils.c: In function 'cigar_to_qwidth2':
cigar_utils.c:861: warning: 'qwidth' may be used uninitialized in this function
gcc -shared -s -static-libgcc -o GenomicRanges.dll tmp.def IRanges_stubs.o R_init_GenomicRanges.o cigar_utils.o -LE:/biocbld/bbs-2.6-bioc/R/bin -lR
installing to E:/biocbld/bbs-2.6-bioc/meat/GenomicRanges.buildbin-libdir/GenomicRanges/libs
  ... done
** R
** inst
** preparing package for lazy loading

Attaching package: 'IRanges'

The following object(s) are masked from 'package:base':

    Map, cbind, mapply, order, paste, pmax, pmax.int, pmin, pmin.int,
    rbind, rep.int, table

** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GenomicRanges' as GenomicRanges_1.0.9.zip

* DONE (GenomicRanges)