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Package 96/389HostnameOS / ArchBUILDCHECKBUILD BIN
DAVIDQuery 1.8.1
Roger Day
Snapshot Date: 2010-10-04 11:22:20 -0700 (Mon, 04 Oct 2010)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_6/madman/Rpacks/DAVIDQuery
Last Changed Rev: 47464 / Revision: 49923
Last Changed Date: 2010-06-14 20:16:02 -0700 (Mon, 14 Jun 2010)
wilson1 Linux (openSUSE 11.1) / x86_64  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: DAVIDQuery
Version: 1.8.1
Command: /home/biocbuild/bbs-2.6-bioc/R/bin/R CMD check --no-vignettes --timings DAVIDQuery_1.8.1.tar.gz
StartedAt: 2010-10-04 17:01:27 -0700 (Mon, 04 Oct 2010)
EndedAt: 2010-10-04 17:03:33 -0700 (Mon, 04 Oct 2010)
EllapsedTime: 125.5 seconds
RetCode: 0
Status:  OK 
CheckDir: DAVIDQuery.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.6-bioc/meat/DAVIDQuery.Rcheck'
* using R version 2.11.1 (2010-05-31)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'DAVIDQuery/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'DAVIDQuery' version '1.8.1'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'DAVIDQuery' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

DAVIDQuery.Rcheck/00install.out:

* install options are ' --no-html'

* installing *source* package 'DAVIDQuery' ...
** R
** inst
** preparing package for lazy loading
Loading required package: bitops
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
This is DAVIDQuery Version  1.8.1   2010-06-11 

* DONE (DAVIDQuery)

DAVIDQuery.Rcheck/DAVIDQuery-Ex.timings:

nameusersystemelapsed
DAVIDQuery 0.044 0.000103.080
bracketedStrings0.0040.0000.002
convertIDList000
findInBrackets000
getAffyChipTypes000
getAffyProbesetList0.1640.0083.262
getAnnotationChoices000
getIdConversionChoices000
requestIDConversion000
testGene2Gene0.1040.0041.497
uploadIDList000