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Package 89/354HostnameOS / ArchBUILDCHECKBUILD BIN
daMA 1.19.0
Jobst Landgrebe
Bioconductor Changelog
Snapshot Date: 2009-12-07 11:32:00 -0800 (Mon, 07 Dec 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/daMA
Last Changed Rev: 42686 / Revision: 43434
Last Changed Date: 2009-10-27 16:45:24 -0700 (Tue, 27 Oct 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 
Package: daMA
Version: 1.19.0
Command: /Library/Frameworks/R.framework/Versions/2.11/Resources/bin/R CMD check --no-vignettes daMA_1.19.0.tar.gz
StartedAt: 2009-12-07 17:03:39 -0800 (Mon, 07 Dec 2009)
EndedAt: 2009-12-07 17:04:00 -0800 (Mon, 07 Dec 2009)
EllapsedTime: 20.8 seconds
RetCode: 0
Status: OK
CheckDir: daMA.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.6-bioc/meat/daMA.Rcheck'
* using R version 2.11.0 Under development (unstable) (2009-11-30 r50622)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'daMA/DESCRIPTION' ... OK
* this is package 'daMA' version '1.19.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'daMA' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: analyseMA.Rd:70: Dropping empty section \note
prepare_Rd: analyseMA.Rd:72: Dropping empty section \seealso
prepare_Rd: cmat.Rd:13-14: Dropping empty section \format
prepare_Rd: cmat.Rd:15-16: Dropping empty section \details
prepare_Rd: cmat.Rd:17-19: Dropping empty section \source
prepare_Rd: cmatB.AB.Rd:13-14: Dropping empty section \format
prepare_Rd: cmatB.AB.Rd:15-16: Dropping empty section \details
prepare_Rd: cmatB.AB.Rd:17-18: Dropping empty section \source
prepare_Rd: core.Rd:42: Dropping empty section \keyword
prepare_Rd: core.Rd:29-30: Dropping empty section \details
prepare_Rd: core.Rd:31-32: Dropping empty section \value
prepare_Rd: core.Rd:38: Dropping empty section \note
prepare_Rd: core.Rd:40: Dropping empty section \seealso
prepare_Rd: core.Rd:41: Dropping empty section \examples
prepare_Rd: data.3x2.Rd:15-16: Dropping empty section \details
prepare_Rd: data.3x2.Rd:21-22: Dropping empty section \references
prepare_Rd: designMA.Rd:66: Dropping empty section \note
prepare_Rd: designMA.Rd:68: Dropping empty section \seealso
prepare_Rd: id.3x2.Rd:14-15: Dropping empty section \details
prepare_Rd: id.3x2.Rd:16-17: Dropping empty section \source
prepare_Rd: id.3x2.Rd:18-19: Dropping empty section \references
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

daMA.Rcheck/00install.out:

* install options are ' --no-html'

* installing *source* package ‘daMA’ ...
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
* DONE (daMA)