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Package 276/354HostnameOS / ArchBUILDCHECKBUILD BIN
RdbiPgSQL 1.21.0
Jianhua Zhang
Bioconductor Changelog
Snapshot Date: 2009-12-07 11:32:00 -0800 (Mon, 07 Dec 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/RdbiPgSQL
Last Changed Rev: 42686 / Revision: 43434
Last Changed Date: 2009-10-27 16:45:24 -0700 (Tue, 27 Oct 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 N O T   S U P P O R T E D
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK [ OK ]
Package: RdbiPgSQL
Version: 1.21.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh RdbiPgSQL_1.21.0.tar.gz /Library/Frameworks/R.framework/Versions/2.11/Resources/bin/R RdbiPgSQL.buildbin-libdir
StartedAt: 2009-12-07 19:26:54 -0800 (Mon, 07 Dec 2009)
EndedAt: 2009-12-07 19:27:03 -0800 (Mon, 07 Dec 2009)
EllapsedTime: 9.8 seconds
RetCode: 0
Status: OK
PackageFile: RdbiPgSQL_1.21.0.tgz
PackageFileSize: 66.23 KiB

Command output

                INSTALLATION WITH 'R CMD INSTALL --preclean --library=RdbiPgSQL.buildbin-libdir RdbiPgSQL_1.21.0.tar.gz'

* installing *source* package ‘RdbiPgSQL’ ...
creating cache ./config.cache
checking for PQconnectdb in -lpq... yes
checking how to run the C preprocessor... cc -E
checking for /usr/include/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/include/pgsql/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/include/postgresql/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/local/include/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/local/include/pgsql/libpq-fe.h... yes
updating cache ./config.cache
creating ./config.status
creating src/Makevars
** libs
** arch - i386
gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include/i386 -I/usr/local/include/pgsql -I/usr/local/include    -fPIC  -g -O2 -Wall -c PgSQL.c -o PgSQL.o
gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include/i386 -I/usr/local/include/pgsql -I/usr/local/include    -fPIC  -g -O2 -Wall -c PgSQLInit.c -o PgSQLInit.o
PgSQL.h:9: warning: ‘mkInteger’ defined but not used
PgSQL.h:18: warning: ‘mkLogical’ defined but not used
PgSQL.h:27: warning: ‘mkString_safe’ defined but not used
PgSQL.h:33: warning: ‘fetchPgString’ defined but not used
PgSQL.h:46: warning: ‘fetchPgInteger’ defined but not used
PgSQL.h:66: warning: ‘fetchPgDouble’ defined but not used
PgSQL.h:89: warning: ‘fetchPgLogical’ defined but not used
gcc-4.2 -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o RdbiPgSQL.so PgSQL.o PgSQLInit.o -lpq -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** R
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
* DONE (RdbiPgSQL)

                INSTALLATION OF ppc LIBS WITH 'R_ARCH=/ppc R CMD INSTALL --preclean --library=RdbiPgSQL.buildbin-libdir --libs-only RdbiPgSQL_1.21.0.tar.gz'

* installing *source* package ‘RdbiPgSQL’ ...
creating cache ./config.cache
checking for PQconnectdb in -lpq... yes
checking how to run the C preprocessor... cc -E
checking for /usr/include/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/include/pgsql/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/include/postgresql/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/local/include/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/local/include/pgsql/libpq-fe.h... yes
updating cache ./config.cache
creating ./config.status
creating src/Makevars
** libs
** arch - ppc
gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include/ppc -I/usr/local/include/pgsql -I/usr/local/include    -fPIC  -g -O2 -c PgSQL.c -o PgSQL.o
gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include/ppc -I/usr/local/include/pgsql -I/usr/local/include    -fPIC  -g -O2 -c PgSQLInit.c -o PgSQLInit.o
gcc-4.2 -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o RdbiPgSQL.so PgSQL.o PgSQLInit.o -lpq -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
* DONE (RdbiPgSQL)

                INSTALLATION OF x86_64 LIBS WITH 'R_ARCH=/x86_64 R CMD INSTALL --preclean --library=RdbiPgSQL.buildbin-libdir --libs-only RdbiPgSQL_1.21.0.tar.gz'

* installing *source* package ‘RdbiPgSQL’ ...
creating cache ./config.cache
checking for PQconnectdb in -lpq... yes
checking how to run the C preprocessor... cc -E
checking for /usr/include/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/include/pgsql/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/include/postgresql/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/local/include/libpq-fe.h... no
checking how to run the C preprocessor... cc -E
checking for /usr/local/include/pgsql/libpq-fe.h... yes
updating cache ./config.cache
creating ./config.status
creating src/Makevars
** libs
** arch - x86_64
gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include/x86_64 -I/usr/local/include/pgsql -I/usr/local/include    -fPIC  -g -O2 -Wall -c PgSQL.c -o PgSQL.o
gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include -I/Library/Frameworks/R.framework/Versions/2.11/Resources/include/x86_64 -I/usr/local/include/pgsql -I/usr/local/include    -fPIC  -g -O2 -Wall -c PgSQLInit.c -o PgSQLInit.o
PgSQL.h:9: warning: ‘mkInteger’ defined but not used
PgSQL.h:18: warning: ‘mkLogical’ defined but not used
PgSQL.h:27: warning: ‘mkString_safe’ defined but not used
PgSQL.h:33: warning: ‘fetchPgString’ defined but not used
PgSQL.h:46: warning: ‘fetchPgInteger’ defined but not used
PgSQL.h:66: warning: ‘fetchPgDouble’ defined but not used
PgSQL.h:89: warning: ‘fetchPgLogical’ defined but not used
gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o RdbiPgSQL.so PgSQL.o PgSQLInit.o -lpq -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
ld: warning in /usr/local/lib/libpq.dylib, missing required architecture x86_64 in file
* DONE (RdbiPgSQL)