Back to the "Multiple platform build/check report"

Package 12/77HostnameOS / ArchBUILDCHECKBUILD BIN
colonCA 1.4.5
W Sylvia Merk
Snapshot Date: 2010-04-02 12:27:31 -0700 (Fri, 02 Apr 2010)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/colonCA
Last Changed Rev: 973 / Revision: 1201
Last Changed Date: 2009-09-15 11:29:54 -0700 (Tue, 15 Sep 2009)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 
Package: colonCA
Version: 1.4.5
Command: /Library/Frameworks/R.framework/Versions/2.10/Resources/bin/R CMD check --no-vignettes colonCA_1.4.5.tar.gz
StartedAt: 2010-04-02 14:20:31 -0700 (Fri, 02 Apr 2010)
EndedAt: 2010-04-02 14:22:29 -0700 (Fri, 02 Apr 2010)
EllapsedTime: 118.1 seconds
RetCode: 0
Status: OK
CheckDir: colonCA.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.5-data-experiment/meat/colonCA.Rcheck'
* using R version 2.10.1 Patched (2009-12-14 r50738)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'colonCA/DESCRIPTION' ... OK
* this is package 'colonCA' version '1.4.5'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'colonCA' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

colonCA.Rcheck/00install.out:

* install options are ' --no-html'

* installing *source* package ‘colonCA’ ...
** R
** data
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
*** installing help indices
** building package indices ...
* DONE (colonCA)