flowStats 1.4.0
Florian Hahne and Chao-Jen Wong
| Snapshot Date: 2010-04-02 23:28:25 -0700 (Fri, 02 Apr 2010) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_5/madman/Rpacks/flowStats | | Last Changed Rev: 42684 / Revision: 45705 | | Last Changed Date: 2009-10-27 16:33:29 -0700 (Tue, 27 Oct 2009) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | WARNINGS | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | [ WARNINGS ] | OK |
* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.5-bioc/meat/flowStats.Rcheck'
* using R version 2.10.1 Patched (2009-12-14 r50738)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'flowStats/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'flowStats' version '1.4.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'flowStats' can be installed ... WARNING
Found the following significant warnings:
Warning: Found methods to import for function "addName" but not the generic itself
See '/Users/biocbuild/bbs-2.5-bioc/meat/flowStats.Rcheck/00install.out' for details.
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
idFeatures: no visible binding for global variable ‘cluster’
normQA: no visible binding for global variable ‘group’
normQA: no visible binding for global variable ‘hasPeak’
warpSet: no visible binding for global variable ‘wfuns’
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK
WARNING: There was 1 warning, see
/Users/biocbuild/bbs-2.5-bioc/meat/flowStats.Rcheck/00check.log
for details
* install options are ' --no-html'
* installing *source* package ‘flowStats’ ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: rrcov
Loading required package: robustbase
Loading required package: pcaPP
Loading required package: mvtnorm
Scalable Robust Estimators with High Breakdown Point (version 1.0-00)
Attaching package: 'flowCore'
The following object(s) are masked from package:stats :
alias,
filter
Loading required package: splines
Loading required package: zoo
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
Warning: Found methods to import for function "addName" but not the generic itself
** help
*** installing help indices
** building package indices ...
* DONE (flowStats)