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Package 93/353HostnameOS / ArchBUILDCHECKBUILD BIN
DEGseq 1.0.5
Likun Wang
Snapshot Date: 2010-04-02 23:28:25 -0700 (Fri, 02 Apr 2010)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_5/madman/Rpacks/DEGseq
Last Changed Rev: 43788 / Revision: 45705
Last Changed Date: 2009-12-30 05:30:21 -0800 (Wed, 30 Dec 2009)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: DEGseq
Version: 1.0.5
Command: E:\biocbld\bbs-2.5-bioc\R\bin\R.exe CMD check --no-vignettes DEGseq_1.0.5.tar.gz
StartedAt: 2010-04-03 04:30:36 -0700 (Sat, 03 Apr 2010)
EndedAt: 2010-04-03 04:31:36 -0700 (Sat, 03 Apr 2010)
EllapsedTime: 59.9 seconds
RetCode: 0
Status: OK
CheckDir: DEGseq.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.5-bioc/meat/DEGseq.Rcheck'
* using R version 2.10.1 (2009-12-14)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'DEGseq/DESCRIPTION' ... OK
* this is package 'DEGseq' version '1.0.5'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'DEGseq' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $BLAS_LIBS ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

DEGseq.Rcheck/00install.out:

* install options are ' --no-html'

* installing *source* package 'DEGseq' ...
** libs
  making DLL ...
g++ -I"e:/biocbld/bbs-2.5-bioc/R/include"        -O2 -Wall  -c getGeneExp.cpp -o getGeneExp.o
g++ -shared -s -o DEGseq.dll tmp.def getGeneExp.o -Le:/biocbld/bbs-2.5-bioc/R/bin -lR
  ... done
** R
** data
** inst
** preparing package for lazy loading
Loading required package: tcltk
Loading Tcl/Tk interface ... done
Loading required package: impute
** help
*** installing help indices
** building package indices ...
** MD5 sums
* DONE (DEGseq)