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Package 146/353HostnameOS / ArchBUILDCHECKBUILD BIN
GEOmetadb 1.6.0
Jack Zhu
Snapshot Date: 2009-12-13 23:30:35 -0800 (Sun, 13 Dec 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_5/madman/Rpacks/GEOmetadb
Last Changed Rev: 42684 / Revision: 43539
Last Changed Date: 2009-10-27 16:33:29 -0700 (Tue, 27 Oct 2009)
wilson2 Linux (openSUSE 11.1) / x86_64 [ ERROR ] skipped 
liverpool Windows Server 2003 R2 (32-bit) / x64  ERROR  skipped  skipped 
pitt Mac OS X Tiger (10.4.11) / i386  ERROR  skipped  skipped 
pelham Mac OS X Leopard (10.5.8) / i386  ERROR  skipped  skipped 
Package: GEOmetadb
Version: 1.6.0
Command: /home/biocbuild/bbs-2.5-bioc/R/bin/R CMD build GEOmetadb
StartedAt: 2009-12-14 02:06:18 -0800 (Mon, 14 Dec 2009)
EndedAt: 2009-12-14 02:06:23 -0800 (Mon, 14 Dec 2009)
EllapsedTime: 4.5 seconds
RetCode: 1
Status: ERROR
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'GEOmetadb/DESCRIPTION' ... OK
* preparing 'GEOmetadb':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* installing *source* package ‘GEOmetadb’ ...
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: RCurl
Loading required package: bitops
Loading required package: DBI
** help
*** installing help indices
** building package indices ...
* DONE (GEOmetadb)
* creating vignettes ... ERROR
Loading required package: GEOquery
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: RCurl
Loading required package: bitops
Loading required package: RSQLite
Loading required package: DBI
trying URL 'http://gbnci.abcc.ncifcrf.gov/geo/GEOmetadb.sqlite.gz'

Error: processing vignette 'GEOmetadb.Rnw' failed with diagnostics:
 chunk 3 
Error in download.file("http://gbnci.abcc.ncifcrf.gov/geo/GEOmetadb.sqlite.gz",  : 
  cannot open URL 'http://gbnci.abcc.ncifcrf.gov/geo/GEOmetadb.sqlite.gz'
In addition: Warning message:
In download.file("http://gbnci.abcc.ncifcrf.gov/geo/GEOmetadb.sqlite.gz",  :
  cannot open: HTTP status was '404 Not Found'
Execution halted