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Package 156/319HostnameOS / ArchBUILDCHECKBUILD BIN
iterativeBMA 1.2.0
Ka Yee Yeung
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/iterativeBMA
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK [ OK ] OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: iterativeBMA
Version: 1.2.0
Command: /Library/Frameworks/R.framework/Versions/2.9/Resources/bin/R CMD check --no-vignettes iterativeBMA_1.2.0.tar.gz
StartedAt: 2009-10-20 17:55:11 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 17:56:28 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 77.7 seconds
RetCode: 0
Status: OK
CheckDir: iterativeBMA.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.4-bioc/meat/iterativeBMA.Rcheck'
* using R version 2.9.2 Patched (2009-08-24 r49419)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'iterativeBMA/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'iterativeBMA' version '1.2.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'iterativeBMA' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd files against version 2 parser ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

iterativeBMA.Rcheck/00install.out:

* Installing *source* package ‘iterativeBMA’ ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: survival
Loading required package: splines
Loading required package: leaps

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

** help
*** installing help indices
 >>> Building/Updating help pages for package 'iterativeBMA'
     Formats: text html latex example 
Note: removing empty section \note in file 'BssWssFast.Rd'
  BssWssFast                        text    html    latex   example
Note: removing empty section \note in file 'bma_predict.Rd'
  bma_predict                       text    html    latex   example
Note: removing empty section \note in file 'brier_score.Rd'
  brier_score                       text    html    latex   example
  imageplot_iterate_bma             text    html    latex   example
  iterateBMAglm_train               text    html    latex   example
  iterateBMAglm_train_predict       text    html    latex   example
  iterateBMAglm_train_predict_test  text    html    latex   example
  iterateBMAglm_wrapper             text    html    latex   example
  iterativeBMA-internal             text    html    latex
  iterativeBMA-package              text    html    latex   example
Note: removing empty section \details in file 'testClass.Rd'
  testClass                         text    html    latex
  testData                          text    html    latex
Note: removing empty section \details in file 'trainClass.Rd'
  trainClass                        text    html    latex
  trainData                         text    html    latex
** building package indices ...
* DONE (iterativeBMA)