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Package 8/64HostnameOS / ArchBUILDCHECKBUILD BIN
CCl4 1.0.7
Audrey Kauffmann
Snapshot Date: 2009-04-10 00:03:00 -0700 (Fri, 10 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/CCl4
Last Changed Rev: 545 / Revision: 760
Last Changed Date: 2008-01-25 02:00:42 -0800 (Fri, 25 Jan 2008)
wilson2 Linux (openSUSE 10.3) / x86_64  OK [ OK ]
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: CCl4
Version: 1.0.7
Command: /home/biocbuild/bbs-2.3-bioc/R/bin/R CMD check --no-vignettes CCl4_1.0.7.tar.gz
StartedAt: 2009-04-10 01:20:14 -0700 (Fri, 10 Apr 2009)
EndedAt: 2009-04-10 01:20:47 -0700 (Fri, 10 Apr 2009)
EllapsedTime: 33.4 seconds
RetCode: 0
Status: OK
CheckDir: CCl4.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.3-data-experiment/meat/CCl4.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'CCl4/DESCRIPTION' ... OK
* this is package 'CCl4' version '1.0.7'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'CCl4' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating CCl4-Ex.R ... OK
* checking examples ... OK
* checking tests ...
make[1]: Entering directory `/loc/home/biocbuild/bbs-2.3-data-experiment/meat/CCl4.Rcheck/tests'
  Running 'validDataFiles.R'
  Comparing 'validDataFiles.Rout' to 'validDataFiles.Rout.save' ...1,18d0
< 
< 
< > dataPath = system.file("extdata", package="CCl4")
< > if(setequal(dir(dataPath),
< +             c("251316214319_auto_479-628.gpr", "251316214320_auto_478-629.gpr",
< +               "251316214321_auto_410-592.gpr", "251316214329_auto_429-673.gpr",
< +               "251316214330_auto_457-658.gpr", "251316214331_auto_431-588.gpr",
< +               "251316214332_auto_492-625.gpr", "251316214333_auto_487-712.gpr",
< +               "251316214379_auto_443-617.gpr", "251316214380_auto_493-682.gpr",
< +               "251316214381_auto_497-602.gpr", "251316214382_auto_481-674.gpr",
< +               "251316214384_auto_450-642.gpr", "251316214389_auto_456-694.gpr",
< +               "251316214390_auto_456-718.gpr", "251316214391_auto_475-599.gpr",
< +               "251316214393_auto_460-575.gpr", "251316214394_auto_463-521.gpr",
< +               "samplesInfo.txt", "013162_D_SequenceList_20060815.txt"))) {
< +   cat("Fine.\n")
< + } else {
< +   cat(sprintf("Contents of %s differs from expectation.\n", dataPath))
< + }
20d1
< > 
 OK
make[1]: Leaving directory `/loc/home/biocbuild/bbs-2.3-data-experiment/meat/CCl4.Rcheck/tests'
 OK
* checking package vignettes in 'inst/doc' ... OK
* creating CCl4-manual.tex ... OK
* checking CCl4-manual.tex using pdflatex ... OK

CCl4.Rcheck/00install.out:

* Installing *source* package 'CCl4' ...
** data
** inst
** help
 >>> Building/Updating help pages for package 'CCl4'
     Formats: text html latex example 
  CCl4                              text    html    latex   example
** building package indices ...
* DONE (CCl4)