Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O [P] Q  R  S  T  U  V  W  X  Y  Z 

Package 216/294HostnameOS / ArchBUILDCHECKBUILD BIN
prada 1.18.0
Florian Hahne
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/prada
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386 [ OK ] OK  OK 
Package: prada
Version: 1.18.0
Command: /Library/Frameworks/R.framework/Versions/2.8/Resources/bin/R CMD build prada
StartedAt: 2009-04-18 15:06:04 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 15:06:39 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 35.2 seconds
RetCode: 0
Status: OK
PackageFile: prada_1.18.0.tar.gz
PackageFileSize: 624.5 KiB

Command output

* checking for file 'prada/DESCRIPTION' ... OK
* preparing 'prada':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'prada' ...
** libs
** arch - i386
gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -c inPolygon.c -o inPolygon.o
gcc-4.2 -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names  -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o prada.so inPolygon.o   -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** arch - ppc
gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -Wall -c inPolygon.c -o inPolygon.o
gcc-4.2 -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names  -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o prada.so inPolygon.o   -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** arch - ppc64
gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include/ppc64  -I/usr/local/include    -fPIC  -g -O2 -Wall -c inPolygon.c -o inPolygon.o
gcc-4.2 -arch ppc64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names  -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o prada.so inPolygon.o   -L/Library/Frameworks/R.framework/Versions/2.8/Resources/lib/ppc64 -lR -dylib_file libRblas.dylib:/Library/Frameworks/R.framework/Versions/2.8/Resources/lib/ppc64/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** arch - x86_64
gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include/x86_64  -I/usr/local/include    -fPIC  -g -O2 -Wall -c inPolygon.c -o inPolygon.o
gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names  -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o prada.so inPolygon.o   -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: RColorBrewer
Loading required package: grid
Loading required package: rrcov
Loading required package: robustbase
Loading required package: pcaPP
Loading required package: mvtnorm
pcaPP 0.1-1 loaded
Scalable Robust Estimators with High Breakdown Point (version 0.5-01)
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Creating a new generic function for "colnames" in "prada"
Creating a new generic function for "nrow" in "prada"
Creating a new generic function for "ncol" in "prada"
Creating a new generic function for "split" in "prada"
** help
 >>> Building/Updating help pages for package 'prada'
     Formats: text html latex example 
  analysePlate                      text    html    latex   example
  as.all                            text    html    latex   example
  barploterrbar                     text    html    latex   example
Note: ignoring empty \keyword entries in file 'combineFrames.Rd'
Note: removing empty section \details in file 'combineFrames.Rd'
Note: removing empty section \seealso in file 'combineFrames.Rd'
  combineFrames                     text    html    latex   example
  csApply                           text    html    latex   example
  cytoFrame-class                   text    html    latex   example
  cytoSet-class                     text    html    latex   example
  data-cytoFrame                    text    html    latex   example
  data-cytoSet                      text    html    latex   example
Note: ignoring empty \keyword entries in file 'devDims.Rd'
  devDims                           text    html    latex   example
Note: ignoring empty \keyword entries in file 'devRes.Rd'
  devRes                            text    html    latex   example
Note: ignoring empty \keyword entries in file 'fitNorm2.Rd'
  fitNorm2                          text    html    latex   example
  gate-class                        text    html    latex   example
  gateSet-class                     text    html    latex   example
  getPradaPar                       text    html    latex   example
  new-internal                      text    html    latex
Note: ignoring empty \keyword entries in file 'plotNorm2.Rd'
  plotNorm2                         text    html    latex   example
  plotPlate                         text    html    latex   example
  readCytoSet                       text    html    latex   example
  readFCS                           text    html    latex   example
Note: removing empty section \examples in file 'readFCSaux.Rd'
  readFCSaux                        text    html    latex
Note: ignoring empty \keyword entries in file 'removeCensored.Rd'
Note: removing empty section \seealso in file 'removeCensored.Rd'
  removeCensored                    text    html    latex   example
Note: removing empty section \seealso in file 'tcltkProgress.Rd'
  tcltkProgress                     text    html    latex   example
  threePanelPlot                    text    html    latex   example
Note: ignoring empty \keyword entries in file 'thresholds.Rd'
Note: removing empty section \seealso in file 'thresholds.Rd'
  thresholds                        text    html    latex   example
  touchFCS                          text    html    latex
Note: ignoring empty \keyword entries in file 'vpLocation.Rd'
  vpLocation                        text    html    latex   example
** building package indices ...
KernSmooth 2.22 installed
Copyright M. P. Wand 1997
Loading required package: methods
* DONE (prada)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'prada_1.18.0.tar.gz'