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Package 163/294HostnameOS / ArchBUILDCHECKBUILD BIN
makecdfenv 1.20.0
James W. MacDonald
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/makecdfenv
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK [ OK ]
Package: makecdfenv
Version: 1.20.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh makecdfenv_1.20.0.tar.gz /Library/Frameworks/R.framework/Versions/2.8/Resources/bin/R makecdfenv.buildbin-libdir
StartedAt: 2009-04-18 18:53:49 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 18:54:03 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 14.0 seconds
RetCode: 0
Status: OK
PackageFile: makecdfenv_1.20.0.tgz
PackageFileSize: 3.118 MiB

Command output

                INSTALLATION WITH 'R CMD INSTALL --library=makecdfenv.buildbin-libdir makecdfenv_1.20.0.tar.gz'

* Installing *source* package 'makecdfenv' ...
creating cache ./config.cache
checking how to run the C preprocessor... cc -E
checking for main in -lz... yes
checking for zlib.h... yes
checking if zlib version >= 1.1.3... yes
updating cache ./config.cache
creating ./config.status
creating src/Makevars
** libs
** arch - i386
gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include/i386 -DHAVE_ZLIB=1  -I/usr/local/include    -fPIC  -g -O2 -Wall -c read_cdffile.c -o read_cdffile.o
gcc-4.2 -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names  -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o makecdfenv.so read_cdffile.o -lz   -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affy
Loading required package: affyio
** help
 >>> Building/Updating help pages for package 'makecdfenv'
     Formats: text html latex example 
  Cdf-class                         text    html    latex
  getInfoInAffyFile                 text    html    latex
  make.cdf.env                      text    html    latex   example
  make.cdf.package                  text    html    latex   example
  pmormm                            text    html    latex
  read.cdffile                      text    html    latex   example
** building package indices ...
* DONE (makecdfenv)

                INSTALLATION OF ppc LIBS WITH 'R_ARCH=/ppc R CMD INSTALL --library=makecdfenv.buildbin-libdir --libs-only makecdfenv_1.20.0.tar.gz'

* Installing *source* package 'makecdfenv' ...
creating cache ./config.cache
checking how to run the C preprocessor... cc -E
checking for main in -lz... yes
checking for zlib.h... yes
checking if zlib version >= 1.1.3... yes
updating cache ./config.cache
creating ./config.status
creating src/Makevars
** libs
** arch - ppc
gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include/ppc -DHAVE_ZLIB=1  -I/usr/local/include    -fPIC  -g -O2 -Wall -c read_cdffile.c -o read_cdffile.o
gcc-4.2 -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names  -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o makecdfenv.so read_cdffile.o -lz   -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
* DONE (makecdfenv)

                INSTALLATION OF x86_64 LIBS WITH 'R_ARCH=/x86_64 R CMD INSTALL --library=makecdfenv.buildbin-libdir --libs-only makecdfenv_1.20.0.tar.gz'

* Installing *source* package 'makecdfenv' ...
creating cache ./config.cache
checking how to run the C preprocessor... cc -E
checking for main in -lz... yes
checking for zlib.h... yes
checking if zlib version >= 1.1.3... yes
updating cache ./config.cache
creating ./config.status
creating src/Makevars
** libs
** arch - x86_64
gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include/x86_64 -DHAVE_ZLIB=1  -I/usr/local/include    -fPIC  -g -O2 -Wall -c read_cdffile.c -o read_cdffile.o
gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names  -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o makecdfenv.so read_cdffile.o -lz   -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
* DONE (makecdfenv)