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Package 77/294HostnameOS / ArchBUILDCHECKBUILD BIN
dualKS 1.2.0
Eric J. Kort
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/dualKS
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK [ OK ] OK 
Package: dualKS
Version: 1.2.0
Command: /Library/Frameworks/R.framework/Versions/2.8/Resources/bin/R CMD check --no-vignettes dualKS_1.2.0.tar.gz
StartedAt: 2009-04-18 17:18:26 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 17:19:27 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 60.9 seconds
RetCode: 0
Status: OK
CheckDir: dualKS.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.3-bioc/meat/dualKS.Rcheck'
* using R version 2.8.1 Patched (2009-03-18 r48200)
* using session charset: ASCII
* checking for file 'dualKS/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'dualKS' version '1.2.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'dualKS' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating dualKS-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating dualKS-manual.tex ... OK
* checking dualKS-manual.tex using pdflatex ... OK

dualKS.Rcheck/00install.out:

* Installing *source* package 'dualKS' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affy
Creating a new generic function for "summary" in "dualKS"
Creating a new generic function for "plot" in "dualKS"
** help
 >>> Building/Updating help pages for package 'dualKS'
     Formats: text html latex example 
  KS                                text    html    latex   example
  class.DKSClassifier               text    html    latex
  class.DKSGeneScores               text    html    latex
  class.DKSGeneSet                  text    html    latex
  class.DKSPredicted                text    html    latex
  dks                               text    html    latex
  dksClassify                       text    html    latex   example
  dksCustomClass                    text    html    latex   example
  dksPerm                           text    html    latex   example
  dksSelectGenes                    text    html    latex   example
  dksTrain                          text    html    latex   example
  dksWeights                        text    html    latex   example
  dualKS-package                    text    html    latex
** building package indices ...
Loading required package: methods
* DONE (dualKS)