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Package 115/294HostnameOS / ArchBUILDCHECKBUILD BIN
GGtools 3.0.0
Vince Carey
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/GGtools
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386 [ OK ] OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: GGtools
Version: 3.0.0
Command: /Library/Frameworks/R.framework/Versions/2.8/Resources/bin/R CMD build GGtools
StartedAt: 2009-04-18 14:44:11 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 14:46:59 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 168.1 seconds
RetCode: 0
Status: OK
PackageFile: GGtools_3.0.0.tar.gz
PackageFileSize: 95.46 MiB

Command output

* checking for file 'GGtools/DESCRIPTION' ... OK
* preparing 'GGtools':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'GGtools' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: GGBase
Loading required package: GSEABase
Loading required package: AnnotationDbi
Loading required package: annotate
Loading required package: xtable
Loading required package: graph
Loading required package: snpMatrix
Loading required package: survival
Loading required package: splines
Loading required package: RSQLite
Loading required package: DBI
Loading required package: geneplotter
Loading required package: lattice
KernSmooth 2.22 installed
Copyright M. P. Wand 1997

Attaching package: 'geneplotter'


	The following object(s) are masked from package:lattice :

	 panel.smoothScatter 

Loading required package: RColorBrewer
Loading required package: Biostrings
Loading required package: IRanges

Attaching package: 'IRanges'


	The following object(s) are masked from package:Biobase :

	 annotation 


	The following object(s) are masked from package:base :

	 cbind,
	 rbind,
	 sapply 


Attaching package: 'Biostrings'


	The following object(s) are masked from package:graph :

	 complement 


	The following object(s) are masked from package:base :

	 chartr,
	 order,
	 substr,
	 substring 

Loading required package: rtracklayer
Loading required package: RCurl
Loading required package: rpart
** help
 >>> Building/Updating help pages for package 'GGtools'
     Formats: text html latex example 
  gwSnpTests                        text    html    latex   example
  hbTestResults-class               text    html    latex   example
  hbTests-methods                   text    html    latex   example
  hmceuB36.2021                     text    html    latex   example
  invokePhase-methods               text    html    latex   example
  plot-methods                      text    html    latex
  snpm2mapLD                        text    html    latex   example
Note: unmatched right brace in file 'snpm2phase.Rd' on or after line 12
  snpm2phase                        text    html    latex   example
  strMultPop                        text    html    latex   example
  topSnps-methods                   text    html    latex
  trackSet-methods                  text    html    latex
** building package indices ...
Loading required package: methods
* DONE (GGtools)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'GGtools_3.0.0.tar.gz'