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Package 80/294HostnameOS / ArchBUILDCHECKBUILD BIN
EBImage 2.6.0
Gregoire Pau
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/EBImage
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  WARNINGS 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: EBImage
Version: 2.6.0
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD build EBImage
StartedAt: 2009-04-18 16:56:52 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 16:58:43 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 110.8 seconds
RetCode: 0
Status: OK
PackageFile: EBImage_2.6.0.tar.gz
PackageFileSize: 1.057 MiB

Command output

* checking for file 'EBImage/DESCRIPTION' ... OK
* preparing 'EBImage':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.3-bioc/tmpdir/Rinst474825238


---------- Making package EBImage ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making EBImage.d from EBImage.c
making colors.d from colors.c
making conversions.d from conversions.c
making display.d from display.c
making drawable.d from drawable.c
making features_haralick.d from features_haralick.c
making features_hull.d from features_hull.c
making features_moments.d from features_moments.c
making features_zernike.d from features_zernike.c
making filters_distmap.d from filters_distmap.c
making filters_magick.d from filters_magick.c
making filters_morph.d from filters_morph.c
making filters_normalize.d from filters_normalize.c
making filters_thresh.d from filters_thresh.c
making frameDist.d from frameDist.c
making io.d from io.c
making objects.d from objects.c
making tools.d from tools.c
making filters_floodfill.d from filters_floodfill.cpp
making filters_propagate.d from filters_propagate.cpp
making filters_watershed.d from filters_watershed.cpp
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c EBImage.c -o EBImage.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c colors.c -o colors.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c conversions.c -o conversions.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c display.c -o display.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c drawable.c -o drawable.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c features_haralick.c -o features_haralick.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c features_hull.c -o features_hull.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c features_moments.c -o features_moments.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c features_zernike.c -o features_zernike.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c filters_distmap.c -o filters_distmap.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c filters_magick.c -o filters_magick.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c filters_morph.c -o filters_morph.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c filters_normalize.c -o filters_normalize.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c filters_thresh.c -o filters_thresh.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c frameDist.c -o frameDist.o
frameDist.c:27: warning: C99 inline functions are not supported; using GNU89
frameDist.c:27: warning: to disable this warning use -fgnu89-inline or the gnu_inline function attribute
frameDist.c:119: warning: C99 inline functions are not supported; using GNU89
frameDist.c:130: warning: C99 inline functions are not supported; using GNU89
frameDist.c:169: warning: C99 inline functions are not supported; using GNU89
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c io.c -o io.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c objects.c -o objects.o
gcc  -std=gnu99  -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O3 -Wall  -c tools.c -o tools.o
g++   -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O2 -Wall  -c filters_floodfill.cpp -o filters_floodfill.o
g++   -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O2 -Wall  -c filters_propagate.cpp -o filters_propagate.o
g++   -Ie:/biocbld/bbs-2.3-bioc/R/include   -g -O2 -DWIN32 -DUSE_GTK -DGLIB_GETTEXT -mms-bitfields -IC:/Progra~1/ImageMagick-6.4.4-Q16/include -IC:/GTK/include/gtk-2.0 -IC:/GTK/lib/gtk-2.0/include -IC:/GTK/include/atk-1.0 -IC:/GTK/include/cairo -IC:/GTK/include/pango-1.0 -IC:/GTK/include/glib-2.0 -IC:/GTK/lib/glib-2.0/include -IC:/GTK/include/libglade-2.0 -IC:/GTK/include/libxml2 -IC:/GTK/include  -O2 -Wall  -c filters_watershed.cpp -o filters_watershed.o
windres --preprocessor="gcc -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.3-bioc/R/include  -i EBImage_res.rc -o EBImage_res.o
g++   -shared -s  -o EBImage.dll EBImage.def EBImage.o colors.o conversions.o display.o drawable.o features_haralick.o features_hull.o features_moments.o features_zernike.o filters_distmap.o filters_magick.o filters_morph.o filters_normalize.o filters_thresh.o frameDist.o io.o objects.o tools.o filters_floodfill.o filters_propagate.o filters_watershed.o EBImage_res.o  -Le:/biocbld/bbs-2.3-bioc/R/bin -shared -LC:/Progra~1/ImageMagick-6.4.4-Q16 -lCORE_RL_magick_ -lCORE_RL_wand_ -LC:/GTK/lib -lgtk-win32-2.0 -lgdk-win32-2.0 -latk-1.0 -lgdk_pixbuf-2.0 -lpangowin32-1.0 -lpangocairo-1.0 -lpango-1.0 -lcairo -lgobject-2.0 -lgmodule-2.0 -lglib-2.0 -lintl -liconv -lgdi32   -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  preparing package EBImage for lazy loading
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'EBImage'
     Formats: text html latex example chm 
  EBImage-deprecated                text    html    latex           chm
  EBImage-package                   text    html    latex           chm
  Image.generic.methods             text    html    latex           chm
  channel                           text    html    latex   example chm
  class.Image                       text    html    latex   example chm
  class.IndexedImage                text    html    latex   example chm
  constructors                      text    html    latex   example chm
  denoising                         text    html    latex   example chm
  display                           text    html    latex   example chm
  distmap                           text    html    latex   example chm
  drawable                          text    html    latex   example chm
  enhancing                         text    html    latex           chm
  features-edge                     text    html    latex   example chm
  features-haralick                 text    html    latex   example chm
  features-hull                     text    html    latex   example chm
  features-moments                  text    html    latex   example chm
  features-zernike                  text    html    latex   example chm
  filter2                           text    html    latex           chm
  floodfill                         text    html    latex   example chm
  frameDist                         text    html    latex           chm
  getFeatures                       text    html    latex   example chm
  input-output                      text    html    latex   example chm
  internals                         text    html    latex           chm
  matchObjects                      text    html    latex           chm
  morphology                        text    html    latex   example chm
  normalize                         text    html    latex   example chm
  paintObjects                      text    html    latex   example chm
  propagate                         text    html    latex   example chm
  rmObjects                         text    html    latex   example chm
  segmenting                        text    html    latex           chm
  stackObjects                      text    html    latex   example chm
  thresholding                      text    html    latex   example chm
  tile                              text    html    latex   example chm
  transformations                   text    html    latex           chm
  watershed                         text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.3-bioc\meat\EBImage\chm\EBImage.chm





Compile time: 0 minutes, 1 second

36	Topics

503	Local links

15	Internet links

1	Graphic





Created e:\biocbld\bbs-2.3-bioc\meat\EBImage\chm\EBImage.chm, 96,166 bytes

Compression decreased file by 140,354 bytes.

  adding MD5 sums

* DONE (EBImage)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'EBImage_2.6.0.tar.gz'