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Package 67/294HostnameOS / ArchBUILDCHECKBUILD BIN
CORREP 1.8.0
Dongxiao Zhu
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/CORREP
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: CORREP
Version: 1.8.0
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD check --no-vignettes CORREP_1.8.0.tar.gz
StartedAt: 2009-04-18 18:37:47 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 18:38:43 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 55.2 seconds
RetCode: 0
Status: OK
CheckDir: CORREP.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/CORREP.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'CORREP/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'CORREP' version '1.8.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'CORREP' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating CORREP-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating CORREP-manual.tex ... OK
* checking CORREP-manual.tex using pdflatex ... OK

CORREP.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.3-bioc/meat/CORREP.Rcheck


---------- Making package CORREP ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  preparing package CORREP for lazy loading
Loading required package: e1071
Loading required package: class
  installing man source files
  installing indices
Warning in readLines(f[1]) :
  incomplete final line found on 'E:/biocbld/bbs-2.3-bioc/meat/CORREP.Rcheck/00_pkg_src/CORREP/inst/doc/CORREP.Rnw'
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'CORREP'
     Formats: text html latex example chm 
Note: removing empty section \examples in file 'CORREP-package.Rd'
Note: removing empty section \examples in file 'CORREP-package.Rd'
  CORREP-package                    text    html    latex           chm
  cor.LRtest                        text    html    latex   example chm
  cor.LRtest.std                    text    html    latex   example chm
  cor.balance                       text    html    latex   example chm
  cor.bootci                        text    html    latex   example chm
  cor.unbalance                     text    html    latex   example chm
  gal_all                           text    html    latex   example chm
  permutest                         text    html    latex   example chm
  true.member                       text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.3-bioc\meat\CORREP.Rcheck\00_pkg_src\CORREP\chm\CORREP.chm


Compile time: 0 minutes, 0 seconds
10	Topics
30	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.3-bioc\meat\CORREP.Rcheck\00_pkg_src\CORREP\chm\CORREP.chm, 28,919 bytes
Compression decreased file by 11,812 bytes.
  adding MD5 sums

* DONE (CORREP)