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Package 31/294HostnameOS / ArchBUILDCHECKBUILD BIN
ArrayTools 1.2.1
Arthur Li
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/ArrayTools
Last Changed Rev: 36980 / Revision: 38965
Last Changed Date: 2009-01-27 09:39:25 -0800 (Tue, 27 Jan 2009)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386 [ OK ] OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: ArrayTools
Version: 1.2.1
Command: /Library/Frameworks/R.framework/Versions/2.8/Resources/bin/R CMD build ArrayTools
StartedAt: 2009-04-18 15:39:25 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 15:40:25 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 59.8 seconds
RetCode: 0
Status: OK
PackageFile: ArrayTools_1.2.1.tar.gz
PackageFileSize: 775.7 KiB

Command output

* checking for file 'ArrayTools/DESCRIPTION' ... OK
* preparing 'ArrayTools':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'ArrayTools' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: limma
Loading required package: xtable
Creating a new generic function for "summary" in "ArrayTools"
** help
 >>> Building/Updating help pages for package 'ArrayTools'
     Formats: text html latex example 
  Output2HTML                       text    html    latex   example
  QC                                text    html    latex   example
  Sort                              text    html    latex   example
  adjustment                        text    html    latex
  contrastMatrix-class              text    html    latex   example
  createExpressionSet               text    html    latex   example
  createGSEAFiles                   text    html    latex   example
  createIndex                       text    html    latex   example
  createIngenuityFile               text    html    latex   example
  designMatrix-class                text    html    latex   example
  eSetExample                       text    html    latex   example
  exprsExample                      text    html    latex   example
  geneFilter                        text    html    latex   example
  getAdjP                           text    html    latex
  getAnnotation                     text    html    latex
  getCompare1                       text    html    latex
  getCompare2                       text    html    latex
  getContrast                       text    html    latex
  getCovariates                     text    html    latex
  getDesign                         text    html    latex
  getF                              text    html    latex
  getFC                             text    html    latex
  getFCCutoff                       text    html    latex
  getFilterMethod                   text    html    latex
  getID                             text    html    latex
  getIndex                          text    html    latex
  getIntIndex                       text    html    latex
  getInteraction                    text    html    latex
  getLength                         text    html    latex
  getLevel                          text    html    latex
  getNormalizationMethod            text    html    latex
  getP                              text    html    latex
  getPCutoff                        text    html    latex
  getTarget                         text    html    latex
  hugene10stCONTROL                 text    html    latex
  interactionResult-class           text    html    latex   example
  mogene10stCONTROL                 text    html    latex
  output.cls                        text    html    latex
  output.gct                        text    html    latex
  output.ing                        text    html    latex
  pDataExample                      text    html    latex   example
  postInteraction                   text    html    latex   example
  preProcess3prime                  text    html    latex   example
  preProcessGeneST                  text    html    latex   example
  qa3prime                          text    html    latex   example
  qaGeneST                          text    html    latex   example
  regress                           text    html    latex   example
  regressResult-class               text    html    latex   example
  regressionMethod                  text    html    latex
  selectSigGene                     text    html    latex   example
  selectSigGeneInt                  text    html    latex   example
** building package indices ...
* DONE (ArrayTools)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'ArrayTools_1.2.1.tar.gz'