Back to the "Multiple platform build/check report"

Package 12/61HostnameOS / ArchBUILDCHECKBUILD BIN
davidTiling 1.2.8
Wolfgang Huber
Snapshot Date: 2008-10-16 12:02:11 -0700 (Thu, 16 Oct 2008)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/davidTiling
Last Changed Rev: 724 / Revision: 729
Last Changed Date: 2008-10-08 08:55:01 -0700 (Wed, 08 Oct 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: davidTiling
Version: 1.2.8
Command: E:\biocbld\bbs-2.2-bioc\R\bin\R.exe CMD check davidTiling_1.2.8.tar.gz
StartedAt: 2008-10-16 14:09:06 -0700 (Thu, 16 Oct 2008)
EndedAt: 2008-10-16 14:17:39 -0700 (Thu, 16 Oct 2008)
EllapsedTime: 512.8 seconds
RetCode: 0
Status: OK
CheckDir: davidTiling.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-data-experiment/meat/davidTiling.Rcheck'
* using R version 2.7.2 (2008-08-25)
* using session charset: ISO8859-1
* checking for file 'davidTiling/DESCRIPTION' ... OK
* this is package 'davidTiling' version '1.2.8'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'davidTiling' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
GOHyperG: no visible global function definition for
  'replaceSystematicByCommonName'
scoreSegments: no visible binding for global variable 'yeastFeatures'
scoreSegments: no visible binding for global variable 'chrs'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating davidTiling-Ex.R ... OK
* checking examples ... OK
* creating davidTiling-manual.tex ... OK
* checking davidTiling-manual.tex using pdflatex ... OK

davidTiling.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.2-data-experiment/meat/davidTiling.Rcheck


---------- Making package davidTiling ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
Loading required package: methods
  not zipping data
  installing help
Note: removing empty section \examples
Note: removing empty section \examples
Note: removing empty section \examples
Note: removing empty section \examples
Note: removing empty section \details
Note: removing empty section \details
Note: removing empty section \examples
Note: removing empty section \examples
 >>> Building/Updating help pages for package 'davidTiling'
     Formats: text html latex example chm 
  GOHyperG                          text    html    latex           chm
  davidTiling                       text    html    latex   example chm
  getAttributeField                 text    html    latex   example chm
  getGO                             text    html    latex           chm
  gff                               text    html    latex   example chm
  probeAnno                         text    html    latex   example chm
  scatterWithHist                   text    html    latex   example chm
  scoreSegments                     text    html    latex           chm
  showDens                          text    html    latex   example chm
  yeastFeatures                     text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.2-data-experiment\meat\davidTiling.Rcheck\00_pkg_src\davidTiling\chm\davidTiling.chm


Compile time: 0 minutes, 0 seconds
11	Topics
28	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.2-data-experiment\meat\davidTiling.Rcheck\00_pkg_src\davidTiling\chm\davidTiling.chm, 28,100 bytes
Compression decreased file by 6,140 bytes.
  adding MD5 sums

* DONE (davidTiling)