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Package 218/260HostnameOS / ArchBUILDCHECKBUILD BIN
safe 2.2.0
William T. Barry
Snapshot Date: 2008-08-08 00:12:03 -0700 (Fri, 08 Aug 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/safe
Last Changed Rev: 31430 / Revision: 33132
Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686 [ OK ] OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: safe
Version: 2.2.0
Command: /home/biocbuild/bbs-2.2-bioc/R/bin/R CMD build safe
StartedAt: 2008-08-08 03:13:12 -0700 (Fri, 08 Aug 2008)
EndedAt: 2008-08-08 03:17:47 -0700 (Fri, 08 Aug 2008)
EllapsedTime: 274.3 seconds
RetCode: 0
Status: OK
PackageFile: safe_2.2.0.tar.gz
PackageFileSize: 328.2 KiB

Command output

* checking for file 'safe/DESCRIPTION' ... OK
* preparing 'safe':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'safe' ...
** R
** inst
** preparing package for lazy loading
Loading required package: SparseM
Package SparseM (0.78) loaded.  To cite, see citation("SparseM")
Loading required package: GO

******* Deprecation warning *******:

The package 'GO' is deprecated and will not be supported in the future. 

Instead we strongly reccomend that you should start using the 'GO.db' package. 

We hope you will enjoy these new packages.  If you still have questions, you can search 
(http://dir.gmane.org/gmane.science.biology.informatics.conductor) or ask the mailing list 
(http://bioconductor.org/docs/mailList.html).  


Loading required package: annotate
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
** help
 >>> Building/Updating help pages for package 'safe'
     Formats: text html latex example 
  SAFE-class                        text    html    latex
  gene.results                      text    html    latex
  getCmatrix                        text    html    latex   example
  safe-internal                     text    html    latex
  safe                              text    html    latex   example
  safedag                           text    html    latex
  safeplot                          text    html    latex   example
** building package indices ...
* DONE (safe)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'safe_2.2.0.tar.gz'