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Package 137/260HostnameOS / ArchBUILDCHECKBUILD BIN
made4 1.14.0
Aedin Culhane
Snapshot Date: 2008-08-08 00:12:03 -0700 (Fri, 08 Aug 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/made4
Last Changed Rev: 31430 / Revision: 33132
Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK [ OK ]
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: made4
Version: 1.14.0
Command: /home/biocbuild/bbs-2.2-bioc/R/bin/R CMD check made4_1.14.0.tar.gz
StartedAt: 2008-08-08 04:31:06 -0700 (Fri, 08 Aug 2008)
EndedAt: 2008-08-08 04:31:45 -0700 (Fri, 08 Aug 2008)
EllapsedTime: 38.5 seconds
RetCode: 0
Status: OK
CheckDir: made4.Rcheck
Warnings: 0

Command output

* checking for working pdflatex ... OK
* using log directory '/home/biocbuild/bbs-2.2-bioc/meat/made4.Rcheck'
* using R version 2.7.1 (2008-06-23)
* using session charset: ISO8859-1
* checking for file 'made4/DESCRIPTION' ... OK
* this is package 'made4' version '1.14.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'made4' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
getdata: no visible binding for global variable 'intensities'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating made4-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating made4-manual.tex ... OK
* checking made4-manual.tex using pdflatex ... OK

made4.Rcheck/00install.out:

* Installing *source* package 'made4' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: ade4

Attaching package: 'ade4'


	The following object(s) are masked from package:base :

	 within 

** help
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Note: removing empty section \seealso
Note: removing empty section \examples
Note: removing empty section \references
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 >>> Building/Updating help pages for package 'made4'
     Formats: text html latex example 
  NCI60                             text    html    latex   example
  array2ade4                        text    html    latex   example
  bet.coinertia                     text    html    latex   example
  between.graph                     text    html    latex   example
  bga                               text    html    latex   example
  bga.jackknife                     text    html    latex   example
  bga.suppl                         text    html    latex   example
  checkfac                          text    html    latex
  chime3D                           text    html    latex
  cia                               text    html    latex   example
  commonMap                         text    html    latex   example
  comparelists                      text    html    latex   example
  do3d                              text    html    latex   example
  dudi.rwcoa                        text    html    latex
  forrwcoa                          text    html    latex
  genes                             text    html    latex
  genes1d                           text    html    latex   example
  getcol                            text    html    latex   example
  getdata                           text    html    latex
  graph1D                           text    html    latex   example
  heatplot                          text    html    latex   example
  html3D                            text    html    latex   example
  jmol3D                            text    html    latex
  khan                              text    html    latex   example
  ord                               text    html    latex   example
  overview                          text    html    latex   example
  plotarrays                        text    html    latex   example
  plotgenes                         text    html    latex   example
  pretty.dend                       text    html    latex   example
  randomiser                        text    html    latex   example
  s.var                             text    html    latex   example
  sumstats                          text    html    latex   example
  suppl                             text    html    latex   example
  topgenes                          text    html    latex   example
** building package indices ...
* DONE (made4)