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Package 210/251HostnameOS / ArchBUILDCHECKBUILD BIN
RWebServices 1.3.1
Martin Morgan
Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/RWebServices
Last Changed Rev: 29018 / Revision: 29143
Last Changed Date: 2007-12-04 11:08:50 -0800 (Tue, 04 Dec 2007)
lamb1 Linux (SUSE 10.1) / x86_64  ERROR  skipped 
wilson2 Linux (openSUSE 10.3) / x86_64 [ ERROR ] skipped 
wellington Linux (openSUSE 10.3) / i686  ERROR  skipped 
liverpool Windows Server 2003 R2 (32-bit) / x64 N O T   S U P P O R T E D
lemming Windows Server 2003 (32-bit) / x64 N O T   S U P P O R T E D
Package: RWebServices
Version: 1.3.1
Command: /home/biocbuild/bbs-2.2-bioc/R/bin/R CMD build RWebServices
StartedAt: 2007-12-11 02:30:15 -0700 (Tue, 11 Dec 2007)
EndedAt: 2007-12-11 02:30:18 -0700 (Tue, 11 Dec 2007)
EllapsedTime: 2.5 seconds
RetCode: 1
Status: ERROR
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'RWebServices/DESCRIPTION' ... OK
* preparing 'RWebServices':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running cleanup
rm: cannot remove `config.log': No such file or directory
rm: cannot remove `config.status': No such file or directory
rm: cannot remove `inst/scripts/RWebServicesEnv.properties': No such file or directory
* installing the package to re-build vignettes
/tmp/Rinst450702257
* Installing *source* package 'RWebServices' ...

Guessing SJava home: /tmp/Rinst450702257/SJava

configure: creating ./config.status
config.status: creating inst/scripts/RWebServicesEnv.properties
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c init.c -o init.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c RWebServicesConverters.c -o RWebServicesConverters.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o RWebServices.so init.o RWebServicesConverters.o   -L/home/biocbuild/bbs-2.2-bioc/R/lib -lR
** R
** inst
** preparing package for lazy loading
Loading required package: SJava
Error in dyn.load(file, ...) : 
  unable to load shared library '/home/biocbuild/bbs-2.2-bioc/R/library/SJava/libs/SJava.so':
  /home/biocbuild/bbs-2.2-bioc/R/library/SJava/libs/SJava.so: undefined symbol: Rf_initEmbeddedR
Error: package 'SJava' could not be loaded
Execution halted
ERROR: lazy loading failed for package 'RWebServices'
** Removing '/tmp/Rinst450702257/RWebServices'
 ERROR
Installation failed.
Removing '/tmp/Rinst450702257'