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Package 86/251HostnameOS / ArchBUILDCHECKBUILD BIN
GeneRfold 0.1.3
Antoine Lucas
Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/GeneRfold
Last Changed Rev: 28108 / Revision: 29143
Last Changed Date: 2007-10-21 09:10:13 -0700 (Sun, 21 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  ERROR  skipped 
wilson2 Linux (openSUSE 10.3) / x86_64  ERROR  skipped 
wellington Linux (openSUSE 10.3) / i686  ERROR  skipped 
liverpool Windows Server 2003 R2 (32-bit) / x64  ERROR  skipped  skipped 
lemming Windows Server 2003 (32-bit) / x64 [ ERROR ] skipped  skipped 
Package: GeneRfold
Version: 0.1.3
Command: D:\biocbld\bbs-2.2-bioc\R\bin\R.exe CMD build GeneRfold
StartedAt: 2007-12-11 04:03:23 -0700 (Tue, 11 Dec 2007)
EndedAt: 2007-12-11 04:03:33 -0700 (Tue, 11 Dec 2007)
EllapsedTime: 10.2 seconds
RetCode: 1
Status: ERROR
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'GeneRfold/DESCRIPTION' ... OK
* preparing 'GeneRfold':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.2-bioc/tmpdir/Rinst436494866


---------- Making package GeneRfold ------------

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************

  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making viennaR.d from viennaR.c
viennaR.c:11:28: error: ViennaRNA/fold.h: No such file or directory
viennaR.c:12:33: error: ViennaRNA/fold_vars.h: No such file or directory
viennaR.c:13:30: error: ViennaRNA/PS_dot.h: No such file or directory
make[3]: *** [viennaR.d] Error 1
make[2]: *** [srcDynlib] Error 2
make[1]: *** [all] Error 2
make: *** [pkg-GeneRfold] Error 2
*** Installation of GeneRfold failed ***

Removing 'D:/biocbld/bbs-2.2-bioc/tmpdir/Rinst436494866/GeneRfold'
* creating vignettes ... ERROR

Error: processing vignette 'GeneRfold.Rnw' failed with diagnostics:
 chunk 1 
Error in library(GeneRfold) : there is no package called 'GeneRfold'
Execution halted