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Package 17/251HostnameOS / ArchBUILDCHECKBUILD BIN
AnnBuilder 1.17.0
J. Zhang
Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/AnnBuilder
Last Changed Rev: 27716 / Revision: 29143
Last Changed Date: 2007-10-02 18:16:39 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
Package: AnnBuilder
Version: 1.17.0
Command: E:\biocbld\bbs-2.2-bioc\R\bin\R.exe CMD check AnnBuilder_1.17.0.tar.gz
StartedAt: 2007-12-11 04:12:24 -0700 (Tue, 11 Dec 2007)
EndedAt: 2007-12-11 04:13:52 -0700 (Tue, 11 Dec 2007)
EllapsedTime: 87.5 seconds
RetCode: 0
Status: OK
CheckDir: AnnBuilder.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/AnnBuilder.Rcheck'
* using R version 2.7.0 Under development (unstable) (2007-11-14 r43455)
* checking for file 'AnnBuilder/DESCRIPTION' ... OK
* this is package 'AnnBuilder' version '1.17.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'AnnBuilder' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating AnnBuilder-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating AnnBuilder-manual.tex ... OK
* checking AnnBuilder-manual.tex ... OK

AnnBuilder.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.2-bioc/meat/AnnBuilder.Rcheck


---------- Making package AnnBuilder ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  preparing package AnnBuilder for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: XML
Loading required package: annotate
Loading required package: AnnotationDbi
Loading required package: DBI
Loading required package: RSQLite
Loading required package: xtable
  installing man source files
  installing indices
  not zipping data
  installing help
Note: removing empty section \note
Note: removing empty section \note
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \references
Note: removing empty section \references
 >>> Building/Updating help pages for package 'AnnBuilder'
     Formats: text html latex example chm 
  ABPkgBuilder                      text    html    latex   example chm
  EG-class                          text    html    latex           chm
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  writeChrLength                    text    html    latex   example chm
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  writeSourceUrlConfig              text    html  Note: removing empty section \seealso
Note: removing empty section \seealso
  latex           chm
  writeXMLHeader                    text    html    latex   example chm
  yeastAnn                          text    html    latex   example chm
  yeastPkgBuilder                   text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.2-bioc\meat\AnnBuilder.Rcheck\00_pkg_src\AnnBuilder\chm\AnnBuilder.chm


Compile time: 0 minutes, 1 second
59	Topics
482	Local links
26	Internet links
1	Graphic


Created e:\biocbld\bbs-2.2-bioc\meat\AnnBuilder.Rcheck\00_pkg_src\AnnBuilder\chm\AnnBuilder.chm, 121,573 bytes
Compression decreased file by 206,646 bytes.
  adding MD5 sums

* DONE (AnnBuilder)