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BioC 2.13: BUILD report for BSgenome on perceval

This page was generated on 2014-04-05 09:51:51 -0700 (Sat, 05 Apr 2014).

Package 100/750HostnameOS / ArchBUILDCHECKBUILD BIN
BSgenome 1.30.0
H. Pages
Snapshot Date: 2014-04-04 16:20:29 -0700 (Fri, 04 Apr 2014)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_13/madman/Rpacks/BSgenome
Last Changed Rev: 81642 / Revision: 88450
Last Changed Date: 2013-10-14 14:29:21 -0700 (Mon, 14 Oct 2013)
zin1 Linux (Ubuntu 12.04.4 LTS) / x86_64  OK  WARNINGS 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  WARNINGS  OK 
perceval Mac OS X Snow Leopard (10.6.8) / x86_64 [ OK ] WARNINGS  OK 

Summary

Package: BSgenome
Version: 1.30.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data BSgenome
StartedAt: 2014-04-04 20:17:55 -0700 (Fri, 04 Apr 2014)
EndedAt: 2014-04-04 20:19:30 -0700 (Fri, 04 Apr 2014)
EllapsedTime: 94.7 seconds
RetCode: 0
Status:  OK 
PackageFile: BSgenome_1.30.0.tar.gz
PackageFileSize: 514.8 KiB

Command output

* checking for file ‘BSgenome/DESCRIPTION’ ... OK
* preparing ‘BSgenome’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
WARNING: directory ‘BSgenome/inst/BSgenomeDataPkg-template/inst/extdata’ is empty
WARNING: directory ‘BSgenome/tests/unit’ is empty
* building ‘BSgenome_1.30.0.tar.gz’
Warning in utils::tar(filepath, pkgname, compression = "gzip", compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘BSgenome/inst/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-tools/split_human_b36_female.sh’