Package: EatonEtAlChIPseq

Version: 0.0.8

Command: /home/biocbuild/bbs-2.11-bioc/R/bin/R CMD check --no-vignettes --timings EatonEtAlChIPseq_0.0.8.tar.gz

StartedAt: 2013-03-24 12:13:56 -0700 (Sun, 24 Mar 2013)

EndedAt: 2013-03-24 12:16:29 -0700 (Sun, 24 Mar 2013)

EllapsedTime: 153.0 seconds

RetCode: 0

Status:  OK

CheckDir: EatonEtAlChIPseq.Rcheck

Warnings: 0

* using log directory ‘/loc/home/biocbuild/bbs-2.11-data-experiment/meat/EatonEtAlChIPseq.Rcheck’
* using R version 2.15.3 (2013-03-01)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘EatonEtAlChIPseq/DESCRIPTION’ ... OK
* this is package ‘EatonEtAlChIPseq’ version ‘0.0.8’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘EatonEtAlChIPseq’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is 20.6Mb
  sub-directories of 1Mb or more:
    extdata  20.5Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... NOTE
Non-standard license specification:
  Artistic 2.0
Standardizable: TRUE
Standardized license specification:
  Artistic-2.0
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
Examples with CPU or elapsed time > 5s
            user system elapsed
orcAligns 24.774   0.98  31.919
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  ‘/loc/home/biocbuild/bbs-2.11-data-experiment/meat/EatonEtAlChIPseq.Rcheck/00check.log’
for details.

* installing *source* package ‘EatonEtAlChIPseq’ ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

* DONE (EatonEtAlChIPseq)

name	user	system	elapsed
orcAligns	24.774	0.980	31.919
orcPeaks	0.356	0.016	0.372