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Package 214/609HostnameOS / ArchBUILDCHECKBUILD BIN
flowViz 1.22.0
Mike Jiang
Snapshot Date: 2013-03-24 16:21:20 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_11/madman/Rpacks/flowViz
Last Changed Rev: 70050 / Revision: 74773
Last Changed Date: 2012-10-01 15:16:24 -0700 (Mon, 01 Oct 2012)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
perceval Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 

Summary

Package: flowViz
Version: 1.22.0
Command: /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch flowViz_1.22.0.tar.gz
StartedAt: 2013-03-24 23:31:39 -0700 (Sun, 24 Mar 2013)
EndedAt: 2013-03-24 23:35:29 -0700 (Sun, 24 Mar 2013)
EllapsedTime: 230.1 seconds
RetCode: 0
Status:  OK 
CheckDir: flowViz.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.11-bioc/meat/flowViz.Rcheck'
* using R version 2.15.3 (2013-03-01)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'flowViz/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'flowViz' version '1.22.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'flowViz' can be installed ... OK
* checking installed package size ... NOTE
  installed size is  9.5Mb
  sub-directories of 1Mb or more:
    doc   9.2Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
gltext: no visible global function definition for 'unit'
gltext: no visible global function definition for 'gpar'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking sizes of PDF files under 'inst/doc' ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ... OK
Examples with CPU or elapsed time > 5s
                         user system elapsed
xyplot                 23.930  8.219  33.589
ecdfplot               20.101  8.729  30.250
latticeMethods-flowSet 14.583  5.665  20.908
splom                  13.734  2.711  17.041
densityplot            11.543  3.570  15.741
timeLinePlot-methods    7.464  1.105   8.934
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  '/Users/biocbuild/bbs-2.11-bioc/meat/flowViz.Rcheck/00check.log'
for details.

flowViz.Rcheck/00install.out:

* installing *source* package 'flowViz' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'filters.Rnw' 
** testing if installed package can be loaded

* DONE (flowViz)

flowViz.Rcheck/flowViz-Ex.timings:

nameusersystemelapsed
contour-methods2.8050.2403.067
densityplot11.543 3.57015.741
ecdfplot20.101 8.72930.250
flowPlot1.0150.1711.243
flowViz-package000
flowViz.par.get0.0040.0040.009
latticeMethods-flowSet14.583 5.66520.908
splom13.734 2.71117.041
timeLinePlot-methods7.4641.1058.934
xyplot23.930 8.21933.589