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Package 265/609HostnameOS / ArchBUILDCHECKBUILD BIN
GOSemSim 1.16.1
Guangchuang Yu
Snapshot Date: 2013-03-24 16:21:20 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_11/madman/Rpacks/GOSemSim
Last Changed Rev: 72459 / Revision: 74773
Last Changed Date: 2013-01-11 01:14:39 -0800 (Fri, 11 Jan 2013)
lamb1 Linux (openSUSE 12.1) / x86_64  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
perceval Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: GOSemSim
Version: 1.16.1
Command: rm -rf GOSemSim.buildbin-libdir && mkdir GOSemSim.buildbin-libdir && D:\biocbld\bbs-2.11-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=GOSemSim.buildbin-libdir GOSemSim_1.16.1.tar.gz
StartedAt: 2013-03-25 04:00:04 -0700 (Mon, 25 Mar 2013)
EndedAt: 2013-03-25 04:00:55 -0700 (Mon, 25 Mar 2013)
EllapsedTime: 50.4 seconds
RetCode: 0
Status:  OK  
PackageFile: GOSemSim_1.16.1.zip
PackageFileSize: 1.389 MiB

Command output


install for i386

* installing *source* package 'GOSemSim' ...
** libs
g++ -m32 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG    -I"D:/biocbld/bbs-2.11-bioc/R/library/Rcpp/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c ICmethod.cpp -o ICmethod.o
ICmethod.cpp: In function 'SEXPREC* infoContentMethod_cpp(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
ICmethod.cpp:20:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:38:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:48:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:70:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:71:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:78:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:79:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
D:/biocbld/bbs-2.11-bioc/R/library/Rcpp/include/Rcpp/internal/wrap.h:387:2: warning: 'sim' may be used uninitialized in this function [-Wuninitialized]
ICmethod.cpp:91:10: note: 'sim' was declared here
ICmethod.cpp:108:50: warning: 'ic2' may be used uninitialized in this function [-Wuninitialized]
ICmethod.cpp:108:50: warning: 'ic1' may be used uninitialized in this function [-Wuninitialized]
g++ -m32 -shared -s -static-libgcc -o GOSemSim.dll tmp.def ICmethod.o D:/biocbld/bbs-2.11-bioc/R/library/Rcpp/lib/i386/libRcpp.a -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.11-/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.11-bioc/meat/GOSemSim.buildbin-libdir/GOSemSim/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'GOSemSim.Rnw' 
** testing if installed package can be loaded

install for x64

* installing *source* package 'GOSemSim' ...
** libs
g++ -m64 -I"D:/biocbld/BBS-2˜1.11-/R/include" -DNDEBUG    -I"D:/biocbld/bbs-2.11-bioc/R/library/Rcpp/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -mtune=core2 -c ICmethod.cpp -o ICmethod.o
ICmethod.cpp: In function 'SEXPREC* infoContentMethod_cpp(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
ICmethod.cpp:20:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:38:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:48:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:70:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:71:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:78:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
ICmethod.cpp:79:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
D:/biocbld/bbs-2.11-bioc/R/library/Rcpp/include/Rcpp/internal/wrap.h:387:2: warning: 'sim' may be used uninitialized in this function [-Wuninitialized]
ICmethod.cpp:91:10: note: 'sim' was declared here
ICmethod.cpp:108:50: warning: 'ic2' may be used uninitialized in this function [-Wuninitialized]
ICmethod.cpp:108:50: warning: 'ic1' may be used uninitialized in this function [-Wuninitialized]
g++ -m64 -shared -s -static-libgcc -o GOSemSim.dll tmp.def ICmethod.o D:/biocbld/bbs-2.11-bioc/R/library/Rcpp/lib/x64/libRcpp.a -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.11-/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.11-bioc/meat/GOSemSim.buildbin-libdir/GOSemSim/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GOSemSim' as GOSemSim_1.16.1.zip

* DONE (GOSemSim)