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MAQCsubset 1.0.25
VJ Carey
Snapshot Date: 2012-09-23 10:15:26 -0700 (Sun, 23 Sep 2012)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/MAQCsubset
Last Changed Rev: 2037 / Revision: 2159
Last Changed Date: 2012-03-30 15:20:09 -0700 (Fri, 30 Mar 2012)
lamb2 Linux (openSUSE 11.4) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK [ OK ] OK 
petty Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: MAQCsubset
Version: 1.0.25
Command: rm -rf MAQCsubset.buildbin-libdir && mkdir MAQCsubset.buildbin-libdir && E:\biocbld\bbs-2.10-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=MAQCsubset.buildbin-libdir MAQCsubset_1.0.25.tar.gz >MAQCsubset-install.out 2>&1 && E:\biocbld\bbs-2.10-bioc\R\bin\R.exe CMD check --library=MAQCsubset.buildbin-libdir --install="check:MAQCsubset-install.out" --force-multiarch --no-vignettes --timings MAQCsubset_1.0.25.tar.gz && mv MAQCsubset.buildbin-libdir/* MAQCsubset.Rcheck/ && rmdir MAQCsubset.buildbin-libdir
StartedAt: 2012-09-23 13:10:45 -0700 (Sun, 23 Sep 2012)
EndedAt: 2012-09-23 13:17:22 -0700 (Sun, 23 Sep 2012)
EllapsedTime: 396.3 seconds
RetCode: 0
Status:  OK  
CheckDir: MAQCsubset.Rcheck
Warnings: 0

Command output

* using log directory 'E:/biocbld/bbs-2.10-data-experiment/meat/MAQCsubset.Rcheck'
* using R version 2.15.1 (2012-06-22)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'MAQCsubset/DESCRIPTION' ... OK
* this is package 'MAQCsubset' version '1.0.25'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'MAQCsubset' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 64.7Mb
  sub-directories of 1Mb or more:
    data  64.1Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

NOTE: There was 1 note.
See
  'E:/biocbld/bbs-2.10-data-experiment/meat/MAQCsubset.Rcheck/00check.log'
for details.

MAQCsubset.Rcheck/00install.out:


install for i386

* installing *source* package 'MAQCsubset' ...
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import 'image' when loading 'graphics'
Warning: replacing previous import 'density' when loading 'stats'
Warning: replacing previous import 'residuals' when loading 'stats'
Creating a generic function for 'lines' from package 'graphics' in package 'MAQCsubset'
** help
*** installing help indices
** building package indices
** installing vignettes
   'maqcNotes.Rnw' 
** testing if installed package can be loaded
Warning: replacing previous import 'image' when loading 'graphics'
Warning: replacing previous import 'density' when loading 'stats'
Warning: replacing previous import 'residuals' when loading 'stats'

install for x64

* installing *source* package 'MAQCsubset' ...
** testing if installed package can be loaded
Warning: replacing previous import 'image' when loading 'graphics'
Warning: replacing previous import 'density' when loading 'stats'
Warning: replacing previous import 'residuals' when loading 'stats'
* MD5 sums
packaged installation of 'MAQCsubset' as MAQCsubset_1.0.25.zip

* DONE (MAQCsubset)