Package: ITALICSData

Version: 2.0.5

Command: /Library/Frameworks/R.framework/Versions/2.15/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch ITALICSData_2.0.5.tar.gz

StartedAt: 2012-09-23 12:48:25 -0700 (Sun, 23 Sep 2012)

EndedAt: 2012-09-23 12:49:30 -0700 (Sun, 23 Sep 2012)

EllapsedTime: 64.8 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: ITALICSData.Rcheck

Warnings: 1

* using log directory '/Users/biocbuild/bbs-2.10-data-experiment/meat/ITALICSData.Rcheck'
* using R version 2.15.1 (2012-06-22)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'ITALICSData/DESCRIPTION' ... OK
* this is package 'ITALICSData' version '2.0.5'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'ITALICSData' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 182.4Mb
  sub-directories of 1Mb or more:
    extdata  181.6Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... NOTE
prepare_Rd: Hind.QuartetEffect.Rd:6-8: Dropping empty section \usage
prepare_Rd: Hind.QuartetEffect.Rd:14-16: Dropping empty section \format
prepare_Rd: Hind.QuartetEffect.Rd:17: Dropping empty section \source
prepare_Rd: Hind.QuartetEffect.Rd:18-19: Dropping empty section \references
prepare_Rd: Nsp.QuartetEffect.Rd:6-8: Dropping empty section \usage
prepare_Rd: Nsp.QuartetEffect.Rd:14-16: Dropping empty section \format
prepare_Rd: Nsp.QuartetEffect.Rd:17: Dropping empty section \source
prepare_Rd: Nsp.QuartetEffect.Rd:18-19: Dropping empty section \references
prepare_Rd: Sty.QuartetEffect.Rd:6-8: Dropping empty section \usage
prepare_Rd: Sty.QuartetEffect.Rd:14-16: Dropping empty section \format
prepare_Rd: Sty.QuartetEffect.Rd:17: Dropping empty section \source
prepare_Rd: Sty.QuartetEffect.Rd:18-19: Dropping empty section \references
prepare_Rd: Xba.QuartetEffect.Rd:6-8: Dropping empty section \usage
prepare_Rd: Xba.QuartetEffect.Rd:14-16: Dropping empty section \format
prepare_Rd: Xba.QuartetEffect.Rd:17: Dropping empty section \source
prepare_Rd: Xba.QuartetEffect.Rd:18-19: Dropping empty section \references
prepare_Rd: quartetInfo.Rd:12-14: Dropping empty section \format
prepare_Rd: quartetInfo.Rd:15-17: Dropping empty section \source
prepare_Rd: quartetInfo.Rd:18-19: Dropping empty section \references
prepare_Rd: snpInfo.Rd:12-14: Dropping empty section \format
prepare_Rd: snpInfo.Rd:16-18: Dropping empty section \source
prepare_Rd: snpInfo.Rd:19-20: Dropping empty section \references
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                    old_size new_size compress
  quartetInfo.RData    727Kb    515Kb       xz
  snpInfo.RData         68Kb     56Kb       xz
* checking examples ... NONE
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There were 2 notes.
See
  '/Users/biocbuild/bbs-2.10-data-experiment/meat/ITALICSData.Rcheck/00check.log'
for details.

* installing *source* package 'ITALICSData' ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded

* DONE (ITALICSData)