genoCN 1.8.0
Wei Sun
| Snapshot Date: 2012-09-23 17:01:39 -0700 (Sun, 23 Sep 2012) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_10/madman/Rpacks/genoCN | | Last Changed Rev: 64678 / Revision: 69725 | | Last Changed Date: 2012-03-30 15:05:02 -0700 (Fri, 30 Mar 2012) |
| lamb2 | Linux (openSUSE 11.4) / x86_64 | OK | OK | |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | [ OK ] |
| petty | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
install for i386
* installing *source* package 'genoCN' ...
** libs
gcc -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -O3 -Wall -std=gnu99 -mtune=core2 -c tnorm_mle.c -o tnorm_mle.o
gcc -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -O3 -Wall -std=gnu99 -mtune=core2 -c utility.c -o utility.o
gcc -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -O3 -Wall -std=gnu99 -mtune=core2 -c xCNV.c -o xCNV.o
xCNV.c: In function 'emiss':
xCNV.c:317:25: warning: unused variable 'k' [-Wunused-variable]
xCNV.c:317:16: warning: unused variable 'K' [-Wunused-variable]
xCNV.c: In function 'baum_welch':
xCNV.c:787:20: warning: unused variable 'sd_b_tmp' [-Wunused-variable]
xCNV.c:787:10: warning: unused variable 'mu_b_tmp' [-Wunused-variable]
xCNV.c:762:10: warning: variable 'LL' set but not used [-Wunused-but-set-variable]
xCNV.c:1839:24: warning: 'pbf' may be used uninitialized in this function [-Wuninitialized]
xCNV.c:1839:24: warning: 'nGtp' may be used uninitialized in this function [-Wuninitialized]
gcc -shared -s -static-libgcc -o genoCN.dll tmp.def tnorm_mle.o utility.o xCNV.o -LE:/biocbld/BBS-2˜1.10-/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.10-bioc/meat/genoCN.buildbin-libdir/genoCN/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
'genoCN.Rnw'
** testing if installed package can be loaded
install for x64
* installing *source* package 'genoCN' ...
** libs
gcc -m64 -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c tnorm_mle.c -o tnorm_mle.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c utility.c -o utility.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.10-/R/include" -DNDEBUG -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c xCNV.c -o xCNV.o
xCNV.c: In function 'emiss':
xCNV.c:317:25: warning: unused variable 'k' [-Wunused-variable]
xCNV.c:317:16: warning: unused variable 'K' [-Wunused-variable]
xCNV.c: In function 'baum_welch':
xCNV.c:787:20: warning: unused variable 'sd_b_tmp' [-Wunused-variable]
xCNV.c:787:10: warning: unused variable 'mu_b_tmp' [-Wunused-variable]
xCNV.c:762:10: warning: variable 'LL' set but not used [-Wunused-but-set-variable]
xCNV.c:1839:24: warning: 'pbf' may be used uninitialized in this function [-Wuninitialized]
xCNV.c:1839:24: warning: 'nGtp' may be used uninitialized in this function [-Wuninitialized]
gcc -m64 -shared -s -static-libgcc -o genoCN.dll tmp.def tnorm_mle.o utility.o xCNV.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2~1.10-/R/bin/x64 -lR
installing to E:/biocbld/bbs-2.10-bioc/meat/genoCN.buildbin-libdir/genoCN/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'genoCN' as genoCN_1.8.0.zip
* DONE (genoCN)