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Package 146/233HostnameOS / ArchBUILDCHECKBUILD BIN
oligoClasses 1.0.3
Benilton Carvalho
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
Last Changed Rev: 27867 / Revision: 30966
Last Changed Date: 2007-10-09 07:28:03 -0700 (Tue, 09 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
Package: oligoClasses
Version: 1.0.3
Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check oligoClasses_1.0.3.tar.gz
StartedAt: 2008-04-09 18:10:02 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 18:10:43 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 40.9 seconds
RetCode: 0
Status: OK
CheckDir: oligoClasses.Rcheck
Warnings: 0

Command output

* checking for working latex ... OK
* using log directory 'E:/biocbld/bbs-2.1-bioc/meat/oligoClasses.Rcheck'
* using R version 2.6.2 (2008-02-08)
* checking for file 'oligoClasses/DESCRIPTION' ... OK
* this is package 'oligoClasses' version '1.0.3'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'oligoClasses' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating oligoClasses-Ex.R ... OK
* checking examples ... OK
* creating oligoClasses-manual.tex ... OK
* checking oligoClasses-manual.tex ... OK


installing R.css in E:/biocbld/bbs-2.1-bioc/meat/oligoClasses.Rcheck

---------- Making package oligoClasses ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  preparing package oligoClasses for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'oligoClasses'
     Formats: text html latex example chm 
  DBPDInfo-class                    text    html    latex   example chm
  FeatureSet-class                  text    html    latex           chm
  FeatureSetExtensions-class        text    html    latex   example chm
  PDInfo-class                      text    html    latex   example chm
  QuantificationSet-class           text    html    latex   example chm
  SnpCallSet-methods                text    html    latex   example chm
  SnpCallSetPlus-class              text    html    latex   example chm
  SnpCnvFeatureSet-class            text    html    latex   example chm
  SnpCnvQSet-class                  text    html    latex   example chm
  SnpCopyNumberSet-methods          text    html    latex   example chm
  SnpLevelSet-class                 text    html    latex           chm
  SnpQSet-class                     text    html    latex   example chm
  SnpSetExtensions-class            text    html    latex   example chm
  oligoSnpSet-methods               text    html    latex           chm
  platformDesign-class              text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.1-bioc\meat\oligoClasses.Rcheck\00_pkg_src\oligoClasses\chm\oligoClasses.chm

Compile time: 0 minutes, 0 seconds
16	Topics
87	Local links
0	Internet links
1	Graphic

Created e:\biocbld\bbs-2.1-bioc\meat\oligoClasses.Rcheck\00_pkg_src\oligoClasses\chm\oligoClasses.chm, 25,097 bytes
Compression decreased file by 38,888 bytes.
  adding MD5 sums

* DONE (oligoClasses)